Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb9E9Q5G2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhb9E9Q5G2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Gm8097-201ENSMUST00000117903 829 ntBASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Gm6376-201ENSMUST00000209407 580 ntBASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb9E9Q5G2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb9E9Q5G2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb9E9Q5G2 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.83■□□□□ 0.61
Pcdhb9E9Q5G2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb9E9Q5G2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb9E9Q5G2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb9E9Q5G2 Gm7862-201ENSMUST00000121461 292 ntBASIC18.83■□□□□ 0.6
Pcdhb9E9Q5G2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.83■□□□□ 0.6
Pcdhb9E9Q5G2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb9E9Q5G2 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.83■□□□□ 0.6
Pcdhb9E9Q5G2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb9E9Q5G2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb9E9Q5G2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb9E9Q5G2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb9E9Q5G2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Pcdhb9E9Q5G2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Pcdhb9E9Q5G2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb9E9Q5G2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb9E9Q5G2 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.83■□□□□ 0.6
Pcdhb9E9Q5G2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb9E9Q5G2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb9E9Q5G2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pcdhb9E9Q5G2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms