Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a1E9PXX9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a1E9PXX9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a1E9PXX9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.18■□□□□ 0.02
Slc28a1E9PXX9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a1E9PXX9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a1E9PXX9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a1E9PXX9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a1E9PXX9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a1E9PXX9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc28a1E9PXX9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Slc28a1E9PXX9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Gm36967-201ENSMUST00000193814 266 ntBASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Slc28a1E9PXX9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Phf7-203ENSMUST00000226565 1971 ntBASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Gm18115-201ENSMUST00000221209 621 ntBASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Slc28a1E9PXX9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Gm12527-201ENSMUST00000117967 564 ntBASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.15■□□□□ 0.02
Slc28a1E9PXX9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
Slc28a1E9PXX9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.14■□□□□ 0.01
Slc28a1E9PXX9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc28a1E9PXX9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc28a1E9PXX9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms