Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col6a3E9PWQ3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col6a3E9PWQ3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col6a3E9PWQ3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col6a3E9PWQ3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Col6a3E9PWQ3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Col6a3E9PWQ3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col6a3E9PWQ3 Gm13392-201ENSMUST00000117708 150 ntBASIC15.96■□□□□ 0.15
Col6a3E9PWQ3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col6a3E9PWQ3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col6a3E9PWQ3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col6a3E9PWQ3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Col6a3E9PWQ3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Col6a3E9PWQ3 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.96■□□□□ 0.14
Col6a3E9PWQ3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Col6a3E9PWQ3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Col6a3E9PWQ3 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.95■□□□□ 0.14
Col6a3E9PWQ3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col6a3E9PWQ3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col6a3E9PWQ3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col6a3E9PWQ3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col6a3E9PWQ3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col6a3E9PWQ3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col6a3E9PWQ3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col6a3E9PWQ3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col6a3E9PWQ3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col6a3E9PWQ3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col6a3E9PWQ3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Col6a3E9PWQ3 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC15.95■□□□□ 0.14
Col6a3E9PWQ3 Gm28630-201ENSMUST00000187806 498 ntBASIC15.95■□□□□ 0.14
Col6a3E9PWQ3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col6a3E9PWQ3 Gm8410-201ENSMUST00000117225 605 ntBASIC15.94■□□□□ 0.14
Col6a3E9PWQ3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col6a3E9PWQ3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col6a3E9PWQ3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col6a3E9PWQ3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col6a3E9PWQ3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col6a3E9PWQ3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col6a3E9PWQ3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col6a3E9PWQ3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col6a3E9PWQ3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.94■□□□□ 0.14
Col6a3E9PWQ3 Gm7775-201ENSMUST00000218871 853 ntBASIC15.94■□□□□ 0.14
Col6a3E9PWQ3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Col6a3E9PWQ3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col6a3E9PWQ3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.93■□□□□ 0.14
Col6a3E9PWQ3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.93■□□□□ 0.14
Col6a3E9PWQ3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col6a3E9PWQ3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col6a3E9PWQ3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col6a3E9PWQ3 Gm2810-201ENSMUST00000118681 990 ntBASIC15.93■□□□□ 0.14
Col6a3E9PWQ3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col6a3E9PWQ3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.93■□□□□ 0.14
Col6a3E9PWQ3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col6a3E9PWQ3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Col6a3E9PWQ3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col6a3E9PWQ3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col6a3E9PWQ3 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.93■□□□□ 0.14
Col6a3E9PWQ3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.93■□□□□ 0.14
Col6a3E9PWQ3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Col6a3E9PWQ3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Gm11918-201ENSMUST00000121660 179 ntBASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Gm15236-201ENSMUST00000117309 379 ntBASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Gm12742-201ENSMUST00000117326 410 ntBASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col6a3E9PWQ3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.91■□□□□ 0.14
Col6a3E9PWQ3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col6a3E9PWQ3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col6a3E9PWQ3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col6a3E9PWQ3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col6a3E9PWQ3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col6a3E9PWQ3 Gm7593-201ENSMUST00000187246 644 ntBASIC15.91■□□□□ 0.14
Col6a3E9PWQ3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Col6a3E9PWQ3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col6a3E9PWQ3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.91■□□□□ 0.14
Col6a3E9PWQ3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Col6a3E9PWQ3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms