Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Gm45606-201ENSMUST00000209836 2795 ntBASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Hfm1D3Z4R1 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC22.39■■□□□ 1.18
Hfm1D3Z4R1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Hfm1D3Z4R1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC22.39■■□□□ 1.17
Hfm1D3Z4R1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Hfm1D3Z4R1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Hfm1D3Z4R1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Hfm1D3Z4R1 Gm12428-201ENSMUST00000119844 727 ntBASIC22.39■■□□□ 1.17
Hfm1D3Z4R1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Hfm1D3Z4R1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC22.39■■□□□ 1.17
Hfm1D3Z4R1 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC22.39■■□□□ 1.17
Hfm1D3Z4R1 AC124732.2-201ENSMUST00000221977 316 ntBASIC22.39■■□□□ 1.17
Hfm1D3Z4R1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Hfm1D3Z4R1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Hfm1D3Z4R1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Hfm1D3Z4R1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Hfm1D3Z4R1 Gm6598-201ENSMUST00000202719 2615 ntBASIC22.38■■□□□ 1.17
Hfm1D3Z4R1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Hfm1D3Z4R1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Hfm1D3Z4R1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Hfm1D3Z4R1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Hfm1D3Z4R1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
Hfm1D3Z4R1 Gm16198-201ENSMUST00000118766 670 ntBASIC22.38■■□□□ 1.17
Hfm1D3Z4R1 AC127302.2-201ENSMUST00000215212 268 ntBASIC22.38■■□□□ 1.17
Hfm1D3Z4R1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
Hfm1D3Z4R1 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC22.38■■□□□ 1.17
Hfm1D3Z4R1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Hfm1D3Z4R1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Hfm1D3Z4R1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Hfm1D3Z4R1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Hfm1D3Z4R1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC22.37■■□□□ 1.17
Hfm1D3Z4R1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Hfm1D3Z4R1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Hfm1D3Z4R1 Gm29361-201ENSMUST00000183323 2000 ntBASIC22.37■■□□□ 1.17
Hfm1D3Z4R1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Hfm1D3Z4R1 Gm12008-201ENSMUST00000117791 755 ntBASIC22.37■■□□□ 1.17
Hfm1D3Z4R1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Hfm1D3Z4R1 Gm10253-201ENSMUST00000194270 940 ntBASIC22.37■■□□□ 1.17
Hfm1D3Z4R1 Gm7774-201ENSMUST00000200064 533 ntBASIC22.37■■□□□ 1.17
Hfm1D3Z4R1 Gm5626-201ENSMUST00000222151 1058 ntBASIC22.37■■□□□ 1.17
Hfm1D3Z4R1 CT025535.1-201ENSMUST00000227172 491 ntBASIC22.37■■□□□ 1.17
Hfm1D3Z4R1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Hfm1D3Z4R1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Hfm1D3Z4R1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Hfm1D3Z4R1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hfm1D3Z4R1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC22.36■■□□□ 1.17
Hfm1D3Z4R1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Hfm1D3Z4R1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hfm1D3Z4R1 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Hfm1D3Z4R1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC22.36■■□□□ 1.17
Hfm1D3Z4R1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hfm1D3Z4R1 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Hfm1D3Z4R1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC22.36■■□□□ 1.17
Hfm1D3Z4R1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hfm1D3Z4R1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Hfm1D3Z4R1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Gm25287-201ENSMUST00000103846 110 ntBASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Gm22918-201ENSMUST00000103855 110 ntBASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Gm7336-201ENSMUST00000107041 1232 ntBASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Gm9385-201ENSMUST00000117563 472 ntBASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC22.35■■□□□ 1.17
Hfm1D3Z4R1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms