Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim30cD3YVI9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Gm23634-201ENSMUST00000175071 91 ntBASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim30cD3YVI9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim30cD3YVI9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim30cD3YVI9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trim30cD3YVI9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30cD3YVI9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30cD3YVI9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim30cD3YVI9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim30cD3YVI9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30cD3YVI9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.55■□□□□ 0.4
Trim30cD3YVI9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trim30cD3YVI9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30cD3YVI9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30cD3YVI9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30cD3YVI9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30cD3YVI9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30cD3YVI9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30cD3YVI9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim30cD3YVI9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim30cD3YVI9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Actl10-202ENSMUST00000226583 1501 ntBASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.54■□□□□ 0.4
Trim30cD3YVI9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Gm10566-201ENSMUST00000086739 996 ntBASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim30cD3YVI9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trim30cD3YVI9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim30cD3YVI9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim30cD3YVI9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim30cD3YVI9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms