Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx8D3YU81 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx8D3YU81 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx8D3YU81 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx8D3YU81 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Rfx8D3YU81 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx8D3YU81 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rfx8D3YU81 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Rfx8D3YU81 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx8D3YU81 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rfx8D3YU81 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
Rfx8D3YU81 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Rfx8D3YU81 AC114585.2-202ENSMUST00000228094 426 ntBASIC17■□□□□ 0.31
Rfx8D3YU81 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx8D3YU81 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx8D3YU81 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx8D3YU81 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rfx8D3YU81 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx8D3YU81 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rfx8D3YU81 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx8D3YU81 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17■□□□□ 0.31
Rfx8D3YU81 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx8D3YU81 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rfx8D3YU81 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx8D3YU81 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rfx8D3YU81 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx8D3YU81 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.99■□□□□ 0.31
Rfx8D3YU81 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.99■□□□□ 0.31
Rfx8D3YU81 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx8D3YU81 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rfx8D3YU81 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx8D3YU81 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx8D3YU81 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rfx8D3YU81 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx8D3YU81 Gm7367-201ENSMUST00000057611 492 ntBASIC16.99■□□□□ 0.31
Rfx8D3YU81 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx8D3YU81 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx8D3YU81 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx8D3YU81 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx8D3YU81 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx8D3YU81 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx8D3YU81 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx8D3YU81 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx8D3YU81 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Rfx8D3YU81 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx8D3YU81 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.98■□□□□ 0.31
Rfx8D3YU81 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx8D3YU81 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx8D3YU81 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx8D3YU81 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx8D3YU81 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx8D3YU81 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx8D3YU81 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx8D3YU81 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx8D3YU81 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx8D3YU81 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx8D3YU81 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx8D3YU81 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.98■□□□□ 0.31
Rfx8D3YU81 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx8D3YU81 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx8D3YU81 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rfx8D3YU81 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx8D3YU81 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.98■□□□□ 0.31
Rfx8D3YU81 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rfx8D3YU81 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx8D3YU81 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx8D3YU81 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx8D3YU81 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx8D3YU81 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx8D3YU81 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx8D3YU81 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx8D3YU81 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Rfx8D3YU81 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.97■□□□□ 0.31
Rfx8D3YU81 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.97■□□□□ 0.31
Rfx8D3YU81 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.97■□□□□ 0.31
Rfx8D3YU81 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx8D3YU81 Gm21362-201ENSMUST00000194272 928 ntBASIC16.97■□□□□ 0.31
Rfx8D3YU81 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.97■□□□□ 0.31
Rfx8D3YU81 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms