Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn7aB1AYL1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn7aB1AYL1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn7aB1AYL1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Scn7aB1AYL1 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scn7aB1AYL1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn7aB1AYL1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn7aB1AYL1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Scn7aB1AYL1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn7aB1AYL1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn7aB1AYL1 Gm17271-201ENSMUST00000165535 355 ntBASIC20.55■□□□□ 0.88
Scn7aB1AYL1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scn7aB1AYL1 Mir6990-201ENSMUST00000183724 91 ntBASIC20.55■□□□□ 0.88
Scn7aB1AYL1 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scn7aB1AYL1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn7aB1AYL1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scn7aB1AYL1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn7aB1AYL1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn7aB1AYL1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn7aB1AYL1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn7aB1AYL1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn7aB1AYL1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Scn7aB1AYL1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn7aB1AYL1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC20.54■□□□□ 0.88
Scn7aB1AYL1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn7aB1AYL1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn7aB1AYL1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scn7aB1AYL1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn7aB1AYL1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scn7aB1AYL1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn7aB1AYL1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Scn7aB1AYL1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn7aB1AYL1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn7aB1AYL1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn7aB1AYL1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn7aB1AYL1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn7aB1AYL1 Mir6956-201ENSMUST00000183598 62 ntBASIC20.54■□□□□ 0.88
Scn7aB1AYL1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Scn7aB1AYL1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Scn7aB1AYL1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Scn7aB1AYL1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn7aB1AYL1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn7aB1AYL1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn7aB1AYL1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn7aB1AYL1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn7aB1AYL1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Scn7aB1AYL1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Scn7aB1AYL1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scn7aB1AYL1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Scn7aB1AYL1 Gm37171-201ENSMUST00000192636 1185 ntBASIC20.53■□□□□ 0.88
Scn7aB1AYL1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scn7aB1AYL1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scn7aB1AYL1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Scn7aB1AYL1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scn7aB1AYL1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Scn7aB1AYL1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn7aB1AYL1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Scn7aB1AYL1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn7aB1AYL1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn7aB1AYL1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn7aB1AYL1 Mir7036b-201ENSMUST00000184791 63 ntBASIC20.52■□□□□ 0.88
Scn7aB1AYL1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC20.52■□□□□ 0.88
Scn7aB1AYL1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC20.52■□□□□ 0.88
Scn7aB1AYL1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.52■□□□□ 0.88
Scn7aB1AYL1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC20.52■□□□□ 0.88
Scn7aB1AYL1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Scn7aB1AYL1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC20.52■□□□□ 0.88
Scn7aB1AYL1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scn7aB1AYL1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Scn7aB1AYL1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scn7aB1AYL1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Gm44729-201ENSMUST00000206759 2052 ntBASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Gm14722-201ENSMUST00000118943 689 ntBASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Gm11025-201ENSMUST00000140773 466 ntBASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Gm29361-201ENSMUST00000183323 2000 ntBASIC20.51■□□□□ 0.87
Scn7aB1AYL1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Scn7aB1AYL1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms