Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sh2d4bA6X942 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2d4bA6X942 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2d4bA6X942 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.16■□□□□ 0.34
Sh2d4bA6X942 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2d4bA6X942 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2d4bA6X942 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2d4bA6X942 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.16■□□□□ 0.34
Sh2d4bA6X942 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sh2d4bA6X942 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2d4bA6X942 Gm2756-201ENSMUST00000195851 400 ntBASIC17.16■□□□□ 0.34
Sh2d4bA6X942 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.16■□□□□ 0.34
Sh2d4bA6X942 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.16■□□□□ 0.34
Sh2d4bA6X942 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Sh2d4bA6X942 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Sh2d4bA6X942 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2d4bA6X942 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2d4bA6X942 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2d4bA6X942 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2d4bA6X942 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2d4bA6X942 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sh2d4bA6X942 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sh2d4bA6X942 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Gm11779-201ENSMUST00000118541 368 ntBASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Mir5126-201ENSMUST00000175513 77 ntBASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Gm27867-201ENSMUST00000184778 125 ntBASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.15■□□□□ 0.34
Sh2d4bA6X942 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sh2d4bA6X942 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.14■□□□□ 0.34
Sh2d4bA6X942 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Sh2d4bA6X942 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d4bA6X942 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d4bA6X942 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d4bA6X942 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d4bA6X942 Gm15467-201ENSMUST00000120582 445 ntBASIC17.14■□□□□ 0.33
Sh2d4bA6X942 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Sh2d4bA6X942 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.14■□□□□ 0.33
Sh2d4bA6X942 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d4bA6X942 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d4bA6X942 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d4bA6X942 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Sh2d4bA6X942 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d4bA6X942 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d4bA6X942 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Sh2d4bA6X942 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d4bA6X942 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.14■□□□□ 0.33
Sh2d4bA6X942 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d4bA6X942 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.14■□□□□ 0.33
Sh2d4bA6X942 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d4bA6X942 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d4bA6X942 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sh2d4bA6X942 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.13■□□□□ 0.33
Sh2d4bA6X942 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sh2d4bA6X942 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms