Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Gm4559A4IF42 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Gm4559A4IF42 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Gm4559A4IF42 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Gm4559A4IF42 Gm44249-201ENSMUST00000204538 1805 ntBASIC3.32□□□□□ -1.88
Gm4559A4IF42 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Gm4559A4IF42 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Gm4559A4IF42 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Gm4559A4IF42 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Gm4559A4IF42 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Gm4559A4IF42 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Gm4559A4IF42 AC156636.1-201ENSMUST00000218639 2229 ntBASIC3.32□□□□□ -1.88
Gm4559A4IF42 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Gm4559A4IF42 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Gm4559A4IF42 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Gm4559A4IF42 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Gm4559A4IF42 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.32□□□□□ -1.88
Gm4559A4IF42 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Fabp12-201ENSMUST00000029043 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm45084-201ENSMUST00000207096 1957 ntBASIC3.31□□□□□ -1.88
Gm4559A4IF42 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm42706-201ENSMUST00000199733 1910 ntBASIC3.31□□□□□ -1.88
Gm4559A4IF42 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Cyp2c50-202ENSMUST00000080171 1812 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 P2ry14-202ENSMUST00000091112 1795 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm43485-201ENSMUST00000199292 1710 ntBASIC3.31□□□□□ -1.88
Gm4559A4IF42 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 D230017M19Rik-203ENSMUST00000181973 1649 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 AC167669.2-201ENSMUST00000224417 1620 ntBASIC3.31□□□□□ -1.88
Gm4559A4IF42 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm44106-201ENSMUST00000203153 1599 ntBASIC3.31□□□□□ -1.88
Gm4559A4IF42 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm37886-201ENSMUST00000195349 1513 ntBASIC3.31□□□□□ -1.88
Gm4559A4IF42 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 AC158981.2-201ENSMUST00000227565 1537 ntBASIC3.31□□□□□ -1.88
Gm4559A4IF42 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gsta3-201ENSMUST00000027067 1457 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Fam216b-202ENSMUST00000118785 1447 ntTSL 5 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm17083-201ENSMUST00000165849 1366 ntBASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 AC154197.1-201ENSMUST00000225136 1382 ntBASIC3.31□□□□□ -1.88
Gm4559A4IF42 Stmnd1-201ENSMUST00000076622 1363 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm2788-206ENSMUST00000210463 1338 ntTSL 5 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm42606-201ENSMUST00000114209 239 ntBASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm8410-201ENSMUST00000117225 605 ntBASIC3.31□□□□□ -1.88
Gm4559A4IF42 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm15176-201ENSMUST00000117734 135 ntBASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm14550-201ENSMUST00000117918 407 ntBASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm8644-201ENSMUST00000118619 596 ntBASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm13902-201ENSMUST00000120168 605 ntBASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm11606-201ENSMUST00000120706 617 ntBASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm11404-201ENSMUST00000120872 494 ntBASIC3.31□□□□□ -1.88
Gm4559A4IF42 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm8121-201ENSMUST00000153583 499 ntBASIC3.31□□□□□ -1.88
Gm4559A4IF42 Gm24211-201ENSMUST00000158264 107 ntBASIC3.31□□□□□ -1.88
Gm4559A4IF42 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Gm4559A4IF42 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms