Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chd6A3KFM7 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.98□□□□□ -0.33
Chd6A3KFM7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Gm12957-201ENSMUST00000117835 377 ntBASIC12.98□□□□□ -0.33
Chd6A3KFM7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd6A3KFM7 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd6A3KFM7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Gm9908-201ENSMUST00000211534 448 ntBASIC12.97□□□□□ -0.33
Chd6A3KFM7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd6A3KFM7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.97□□□□□ -0.33
Chd6A3KFM7 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.97□□□□□ -0.33
Chd6A3KFM7 Gm15236-201ENSMUST00000117309 379 ntBASIC12.97□□□□□ -0.33
Chd6A3KFM7 Gm16570-201ENSMUST00000161951 436 ntBASIC12.97□□□□□ -0.33
Chd6A3KFM7 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd6A3KFM7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.97□□□□□ -0.33
Chd6A3KFM7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Gm15693-201ENSMUST00000120470 637 ntBASIC12.97□□□□□ -0.33
Chd6A3KFM7 Gm24694-201ENSMUST00000180054 110 ntBASIC12.97□□□□□ -0.33
Chd6A3KFM7 Gm27663-201ENSMUST00000184839 110 ntBASIC12.97□□□□□ -0.33
Chd6A3KFM7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.97□□□□□ -0.33
Chd6A3KFM7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd6A3KFM7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd6A3KFM7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd6A3KFM7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd6A3KFM7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd6A3KFM7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd6A3KFM7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd6A3KFM7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd6A3KFM7 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Chd6A3KFM7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.96□□□□□ -0.33
Chd6A3KFM7 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Chd6A3KFM7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd6A3KFM7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd6A3KFM7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chd6A3KFM7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.96□□□□□ -0.34
Chd6A3KFM7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.96□□□□□ -0.34
Chd6A3KFM7 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Chd6A3KFM7 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Chd6A3KFM7 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Chd6A3KFM7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd6A3KFM7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd6A3KFM7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd6A3KFM7 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.95□□□□□ -0.34
Chd6A3KFM7 Gm10616-201ENSMUST00000205285 2127 ntBASIC12.95□□□□□ -0.34
Chd6A3KFM7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd6A3KFM7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd6A3KFM7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd6A3KFM7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC12.95□□□□□ -0.34
Chd6A3KFM7 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd6A3KFM7 Gm15321-201ENSMUST00000121290 288 ntBASIC12.95□□□□□ -0.34
Chd6A3KFM7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Chd6A3KFM7 Gm38241-201ENSMUST00000192641 898 ntBASIC12.95□□□□□ -0.34
Chd6A3KFM7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd6A3KFM7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd6A3KFM7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Chd6A3KFM7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms