Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC25.16■■□□□ 1.62
Shroom2A2ALU4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Shroom2A2ALU4 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC25.15■■□□□ 1.62
Shroom2A2ALU4 Gm9824-201ENSMUST00000178707 561 ntBASIC25.15■■□□□ 1.62
Shroom2A2ALU4 Gm18827-201ENSMUST00000188341 790 ntBASIC25.15■■□□□ 1.62
Shroom2A2ALU4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC25.15■■□□□ 1.62
Shroom2A2ALU4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Shroom2A2ALU4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC25.15■■□□□ 1.62
Shroom2A2ALU4 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC25.15■■□□□ 1.62
Shroom2A2ALU4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Shroom2A2ALU4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC25.15■■□□□ 1.62
Shroom2A2ALU4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Shroom2A2ALU4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Shroom2A2ALU4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Shroom2A2ALU4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Shroom2A2ALU4 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC25.15■■□□□ 1.62
Shroom2A2ALU4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Shroom2A2ALU4 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Shroom2A2ALU4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Shroom2A2ALU4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Shroom2A2ALU4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Shroom2A2ALU4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Shroom2A2ALU4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Shroom2A2ALU4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
Shroom2A2ALU4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Shroom2A2ALU4 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Shroom2A2ALU4 Gm2810-201ENSMUST00000118681 990 ntBASIC25.14■■□□□ 1.61
Shroom2A2ALU4 Gm17150-201ENSMUST00000165577 381 ntBASIC25.14■■□□□ 1.61
Shroom2A2ALU4 Mir3102-201ENSMUST00000175555 104 ntBASIC25.14■■□□□ 1.61
Shroom2A2ALU4 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Shroom2A2ALU4 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC25.14■■□□□ 1.61
Shroom2A2ALU4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC25.13■■□□□ 1.61
Shroom2A2ALU4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Shroom2A2ALU4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC25.13■■□□□ 1.61
Shroom2A2ALU4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC25.13■■□□□ 1.61
Shroom2A2ALU4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Shroom2A2ALU4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Shroom2A2ALU4 Gm15824-201ENSMUST00000119516 955 ntBASIC25.13■■□□□ 1.61
Shroom2A2ALU4 Gm7901-201ENSMUST00000120430 1597 ntBASIC25.13■■□□□ 1.61
Shroom2A2ALU4 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Shroom2A2ALU4 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Shroom2A2ALU4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Shroom2A2ALU4 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Shroom2A2ALU4 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Shroom2A2ALU4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Shroom2A2ALU4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Shroom2A2ALU4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Shroom2A2ALU4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Shroom2A2ALU4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Shroom2A2ALU4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Shroom2A2ALU4 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Shroom2A2ALU4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Shroom2A2ALU4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Shroom2A2ALU4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
Shroom2A2ALU4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Shroom2A2ALU4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Shroom2A2ALU4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Shroom2A2ALU4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Shroom2A2ALU4 Gm43808-201ENSMUST00000202534 2065 ntBASIC25.12■■□□□ 1.61
Shroom2A2ALU4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Shroom2A2ALU4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Shroom2A2ALU4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC25.11■■□□□ 1.61
Shroom2A2ALU4 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Shroom2A2ALU4 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
Shroom2A2ALU4 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC25.11■■□□□ 1.61
Shroom2A2ALU4 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
Shroom2A2ALU4 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Shroom2A2ALU4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Shroom2A2ALU4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Shroom2A2ALU4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Shroom2A2ALU4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Shroom2A2ALU4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
Shroom2A2ALU4 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC25.1■■□□□ 1.61
Shroom2A2ALU4 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC25.1■■□□□ 1.61
Shroom2A2ALU4 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Shroom2A2ALU4 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Shroom2A2ALU4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Shroom2A2ALU4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
Shroom2A2ALU4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Shroom2A2ALU4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Shroom2A2ALU4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Shroom2A2ALU4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC25.09■■□□□ 1.61
Shroom2A2ALU4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC25.09■■□□□ 1.61
Shroom2A2ALU4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC25.09■■□□□ 1.61
Shroom2A2ALU4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC25.09■■□□□ 1.61
Shroom2A2ALU4 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC25.09■■□□□ 1.61
Shroom2A2ALU4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Shroom2A2ALU4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Shroom2A2ALU4 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC25.09■■□□□ 1.61
Shroom2A2ALU4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Shroom2A2ALU4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Shroom2A2ALU4 Gm6973-201ENSMUST00000117080 721 ntBASIC25.09■■□□□ 1.61
Shroom2A2ALU4 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Shroom2A2ALU4 Gm6218-201ENSMUST00000219812 628 ntBASIC25.09■■□□□ 1.61
Shroom2A2ALU4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC25.09■■□□□ 1.61
Shroom2A2ALU4 Gm29361-201ENSMUST00000183323 2000 ntBASIC25.08■■□□□ 1.61
Shroom2A2ALU4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Shroom2A2ALU4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Shroom2A2ALU4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
Shroom2A2ALU4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms