Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Mir1668-201ENSMUST00000184114 107 ntBASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Gm30025-201ENSMUST00000218555 728 ntBASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav12-1A0N8R1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12-1A0N8R1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12-1A0N8R1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Trav12-1A0N8R1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Gm26039-201ENSMUST00000158152 144 ntBASIC13.39□□□□□ -0.27
Trav12-1A0N8R1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms