Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lnp1A0A1B0GSK3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lnp1A0A1B0GSK3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lnp1A0A1B0GSK3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lnp1A0A1B0GSK3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lnp1A0A1B0GSK3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.39□□□□□ -0.27
Lnp1A0A1B0GSK3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lnp1A0A1B0GSK3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lnp1A0A1B0GSK3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lnp1A0A1B0GSK3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Lnp1A0A1B0GSK3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lnp1A0A1B0GSK3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Lnp1A0A1B0GSK3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lnp1A0A1B0GSK3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lnp1A0A1B0GSK3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Lnp1A0A1B0GSK3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lnp1A0A1B0GSK3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lnp1A0A1B0GSK3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lnp1A0A1B0GSK3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Gm17808-201ENSMUST00000200859 894 ntBASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lnp1A0A1B0GSK3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 AA414768-201ENSMUST00000121924 1257 ntBASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Gm29518-201ENSMUST00000190858 372 ntBASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lnp1A0A1B0GSK3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Gm11950-201ENSMUST00000121615 838 ntBASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Dancr-204ENSMUST00000132389 2347 ntBASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lnp1A0A1B0GSK3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms