Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13n-4A0A0G2JG01 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Gm27000-201ENSMUST00000182943 842 ntBASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13n-4A0A0G2JG01 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Gm10566-201ENSMUST00000086739 996 ntBASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13n-4A0A0G2JG01 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13n-4A0A0G2JG01 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13n-4A0A0G2JG01 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13n-4A0A0G2JG01 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13n-4A0A0G2JG01 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.02□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms