Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Actl10-202ENSMUST00000226583 1501 ntBASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm13168-201ENSMUST00000121771 632 ntBASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm29257-201ENSMUST00000186115 639 ntBASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 AC154649.1-201ENSMUST00000227392 384 ntBASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav13d-4A0A0G2JFX3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms