Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Gm37736-201ENSMUST00000193564 2802 ntBASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Gm26571-201ENSMUST00000181399 666 ntBASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Gm43352-201ENSMUST00000196419 3065 ntBASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Igkv8-28A0A0G2JE47 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Gm6576-201ENSMUST00000169678 883 ntBASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Gm3807-201ENSMUST00000193520 1168 ntBASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Gm45605-201ENSMUST00000210265 4269 ntBASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Igkv8-28A0A0G2JE47 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Gm10584-201ENSMUST00000207036 2628 ntBASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Igkv8-28A0A0G2JE47 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms