Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9n-2A0A0G2JDP3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.71□□□□□ -0.53
Trav9n-2A0A0G2JDP3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9n-2A0A0G2JDP3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9n-2A0A0G2JDP3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9n-2A0A0G2JDP3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms