Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9-4A0A0B4J1K2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Olfr129-201ENSMUST00000122318 993 ntBASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9-4A0A0B4J1K2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gm21362-201ENSMUST00000194272 928 ntBASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9-4A0A0B4J1K2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav9-4A0A0B4J1K2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms