Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Gm8344-201ENSMUST00000119813 856 ntBASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 AW822252-206ENSMUST00000208904 237 ntBASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 AV026068-213ENSMUST00000223675 1171 ntBASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.29■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.29■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Gm7222-201ENSMUST00000117512 906 ntBASIC16.29■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv5-43A0A0B4J1J2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv5-43A0A0B4J1J2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms