Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv19A0A0B4J1H4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm21559-201ENSMUST00000220638 855 ntBASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Gm8587-201ENSMUST00000076538 843 ntBASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv19A0A0B4J1H4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv19A0A0B4J1H4 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.9□□□□□ -0.35
Trbv19A0A0B4J1H4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv19A0A0B4J1H4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv19A0A0B4J1H4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Prob1-201ENSMUST00000097619 3021 ntBASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Gm22697-201ENSMUST00000175194 63 ntBASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Gm37722-201ENSMUST00000193757 208 ntBASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv19A0A0B4J1H4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trbv19A0A0B4J1H4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv19A0A0B4J1H4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv19A0A0B4J1H4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Trbv19A0A0B4J1H4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv19A0A0B4J1H4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv19A0A0B4J1H4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv19A0A0B4J1H4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv19A0A0B4J1H4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv19A0A0B4J1H4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv19A0A0B4J1H4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv19A0A0B4J1H4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.88□□□□□ -0.35
Trbv19A0A0B4J1H4 Gm18101-201ENSMUST00000215769 548 ntBASIC12.88□□□□□ -0.35
Trbv19A0A0B4J1H4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv19A0A0B4J1H4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv19A0A0B4J1H4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv19A0A0B4J1H4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms