Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv5A0A0B4J1G9 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Gm10517-202ENSMUST00000192970 758 ntBASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Gm37025-201ENSMUST00000195159 829 ntBASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv5A0A0B4J1G9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Trbv5A0A0B4J1G9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trbv5A0A0B4J1G9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv5A0A0B4J1G9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv5A0A0B4J1G9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv5A0A0B4J1G9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Trbv5A0A0B4J1G9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv5A0A0B4J1G9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv5A0A0B4J1G9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv5A0A0B4J1G9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv5A0A0B4J1G9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Gm8495-201ENSMUST00000188740 694 ntBASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Gm4968-201ENSMUST00000071458 858 ntBASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trbv5A0A0B4J1G9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms