Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ighv1-47A0A0A6YY41 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.29□□□□□ -0.28
Ighv1-47A0A0A6YY41 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-47A0A0A6YY41 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-47A0A0A6YY41 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-47A0A0A6YY41 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-47A0A0A6YY41 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-47A0A0A6YY41 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-47A0A0A6YY41 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-47A0A0A6YY41 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-47A0A0A6YY41 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ighv1-47A0A0A6YY41 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-47A0A0A6YY41 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ighv1-47A0A0A6YY41 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ighv1-47A0A0A6YY41 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ighv1-47A0A0A6YY41 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Ighv1-47A0A0A6YY41 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ighv1-47A0A0A6YY41 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ighv1-47A0A0A6YY41 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ighv1-47A0A0A6YY41 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ighv1-47A0A0A6YY41 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ighv1-47A0A0A6YY41 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ighv1-47A0A0A6YY41 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ighv1-47A0A0A6YY41 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ighv1-47A0A0A6YY41 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ighv1-47A0A0A6YY41 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ighv1-47A0A0A6YY41 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ighv1-47A0A0A6YY41 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Gm29707-201ENSMUST00000196325 491 ntBASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Gm18421-201ENSMUST00000204122 625 ntBASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Gm21559-201ENSMUST00000220638 855 ntBASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Gm9987-201ENSMUST00000069768 567 ntBASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Gm8587-201ENSMUST00000076538 843 ntBASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ighv1-47A0A0A6YY41 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.26□□□□□ -0.29
Ighv1-47A0A0A6YY41 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ighv1-47A0A0A6YY41 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ighv1-47A0A0A6YY41 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ighv1-47A0A0A6YY41 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ighv1-47A0A0A6YY41 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ighv1-47A0A0A6YY41 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.26□□□□□ -0.29
Ighv1-47A0A0A6YY41 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ighv1-47A0A0A6YY41 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms