Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Gm29707-201ENSMUST00000196325 491 ntBASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav21-dv12A0A075B6C4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav21-dv12A0A075B6C4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Gm27389-201ENSMUST00000183622 195 ntBASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav21-dv12A0A075B6C4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav21-dv12A0A075B6C4 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav21-dv12A0A075B6C4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav21-dv12A0A075B6C4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav21-dv12A0A075B6C4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav21-dv12A0A075B6C4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms