Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Mir1199-201ENSMUST00000117015 119 ntBASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Actl10-202ENSMUST00000226583 1501 ntBASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 App-207ENSMUST00000227737 2827 ntBASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13-4-dv7A0A075B6C2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms