Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Gm44450-201ENSMUST00000199528 114 ntBASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6d-5A0A075B6B9 BC037039-201ENSMUST00000192003 2205 ntBASIC12.98□□□□□ -0.33
Trav6d-5A0A075B6B9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-5A0A075B6B9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-5A0A075B6B9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6d-5A0A075B6B9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6d-5A0A075B6B9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-5A0A075B6B9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6d-5A0A075B6B9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-5A0A075B6B9 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.98□□□□□ -0.33
Trav6d-5A0A075B6B9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-5A0A075B6B9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-5A0A075B6B9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-5A0A075B6B9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-5A0A075B6B9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-5A0A075B6B9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.98□□□□□ -0.33
Trav6d-5A0A075B6B9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-5A0A075B6B9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6d-5A0A075B6B9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6d-5A0A075B6B9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Gm37179-201ENSMUST00000194862 823 ntBASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Gm18421-201ENSMUST00000204122 625 ntBASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6d-5A0A075B6B9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Gm15378-201ENSMUST00000121894 207 ntBASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Gm20049-201ENSMUST00000219950 730 ntBASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6d-5A0A075B6B9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms