Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm13559-201ENSMUST00000120476 863 ntBASIC13.18□□□□□ -0.3
Trav18A0A075B656 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav18A0A075B656 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.18□□□□□ -0.3
Trav18A0A075B656 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav18A0A075B656 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav18A0A075B656 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 App-207ENSMUST00000227737 2827 ntBASIC13.16□□□□□ -0.3
Trav18A0A075B656 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Gm26039-201ENSMUST00000158152 144 ntBASIC13.16□□□□□ -0.3
Trav18A0A075B656 Mir5130-201ENSMUST00000175160 84 ntBASIC13.16□□□□□ -0.3
Trav18A0A075B656 Gm7889-201ENSMUST00000185591 958 ntBASIC13.16□□□□□ -0.3
Trav18A0A075B656 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.16□□□□□ -0.3
Trav18A0A075B656 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav18A0A075B656 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav18A0A075B656 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Mir1668-201ENSMUST00000184114 107 ntBASIC13.15□□□□□ -0.3
Trav18A0A075B656 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav18A0A075B656 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms