Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav10A0A075B642 Gm29518-201ENSMUST00000190858 372 ntBASIC14.28□□□□□ -0.12
Trav10A0A075B642 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav10A0A075B642 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.28□□□□□ -0.12
Trav10A0A075B642 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav10A0A075B642 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav10A0A075B642 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav10A0A075B642 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav10A0A075B642 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav10A0A075B642 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav10A0A075B642 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav10A0A075B642 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trav10A0A075B642 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10A0A075B642 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Trav10A0A075B642 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10A0A075B642 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10A0A075B642 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10A0A075B642 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10A0A075B642 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10A0A075B642 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10A0A075B642 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10A0A075B642 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10A0A075B642 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Trav10A0A075B642 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10A0A075B642 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10A0A075B642 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10A0A075B642 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10A0A075B642 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10A0A075B642 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10A0A075B642 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10A0A075B642 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10A0A075B642 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10A0A075B642 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10A0A075B642 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10A0A075B642 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10A0A075B642 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Trav10A0A075B642 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav10A0A075B642 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10A0A075B642 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10A0A075B642 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav10A0A075B642 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10A0A075B642 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10A0A075B642 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav10A0A075B642 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav10A0A075B642 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav10A0A075B642 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.26□□□□□ -0.13
Trav10A0A075B642 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Gm44430-201ENSMUST00000203376 995 ntBASIC14.25□□□□□ -0.13
Trav10A0A075B642 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.25□□□□□ -0.13
Trav10A0A075B642 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10A0A075B642 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms