Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav10nA0A075B622 Gm29518-201ENSMUST00000190858 372 ntBASIC14.28□□□□□ -0.12
Trav10nA0A075B622 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav10nA0A075B622 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.28□□□□□ -0.12
Trav10nA0A075B622 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav10nA0A075B622 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav10nA0A075B622 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav10nA0A075B622 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav10nA0A075B622 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav10nA0A075B622 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav10nA0A075B622 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav10nA0A075B622 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trav10nA0A075B622 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10nA0A075B622 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Trav10nA0A075B622 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10nA0A075B622 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10nA0A075B622 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10nA0A075B622 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10nA0A075B622 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10nA0A075B622 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10nA0A075B622 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10nA0A075B622 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10nA0A075B622 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Trav10nA0A075B622 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav10nA0A075B622 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10nA0A075B622 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10nA0A075B622 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10nA0A075B622 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10nA0A075B622 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10nA0A075B622 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10nA0A075B622 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10nA0A075B622 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10nA0A075B622 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10nA0A075B622 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10nA0A075B622 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10nA0A075B622 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Trav10nA0A075B622 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav10nA0A075B622 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10nA0A075B622 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10nA0A075B622 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav10nA0A075B622 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10nA0A075B622 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav10nA0A075B622 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav10nA0A075B622 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav10nA0A075B622 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.26□□□□□ -0.13
Trav10nA0A075B622 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Gm44430-201ENSMUST00000203376 995 ntBASIC14.25□□□□□ -0.13
Trav10nA0A075B622 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav10nA0A075B622 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms