Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6-1A0A075B5Z8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Gm21814-202ENSMUST00000203277 873 ntBASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6-1A0A075B5Z8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-1A0A075B5Z8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6-1A0A075B5Z8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.35
Trav6-1A0A075B5Z8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Trav6-1A0A075B5Z8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6-1A0A075B5Z8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-1A0A075B5Z8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms