Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 uc_338.20-201ENST00000621563 178 ntBASIC2.75□□□□□ -1.97
CDK11AQ9UQ88 AC022513.1-201ENST00000624512 117 ntBASIC2.75□□□□□ -1.97
CDK11AQ9UQ88 WWP1P1-201ENST00000466609 2769 ntBASIC2.74□□□□□ -1.97
CDK11AQ9UQ88 Y_RNA.20-201ENST00000362479 113 ntBASIC2.74□□□□□ -1.97
CDK11AQ9UQ88 Y_RNA.477-201ENST00000384352 108 ntBASIC2.74□□□□□ -1.97
CDK11AQ9UQ88 MIR562-201ENST00000384894 95 ntBASIC2.74□□□□□ -1.97
CDK11AQ9UQ88 SUB1P4-201ENST00000566062 339 ntBASIC2.74□□□□□ -1.97
CDK11AQ9UQ88 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CDK11AQ9UQ88 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CDK11AQ9UQ88 RNU6-662P-201ENST00000384253 104 ntBASIC2.73□□□□□ -1.97
CDK11AQ9UQ88 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CDK11AQ9UQ88 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CDK11AQ9UQ88 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.73□□□□□ -1.97
CDK11AQ9UQ88 AL162725.1-201ENST00000435405 301 ntBASIC2.73□□□□□ -1.97
CDK11AQ9UQ88 HSPE1P21-201ENST00000438283 308 ntBASIC2.73□□□□□ -1.97
CDK11AQ9UQ88 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.73□□□□□ -1.97
CDK11AQ9UQ88 RNU7-116P-201ENST00000516940 62 ntBASIC2.73□□□□□ -1.97
CDK11AQ9UQ88 AC073413.2-201ENST00000604332 360 ntBASIC2.73□□□□□ -1.97
CDK11AQ9UQ88 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.73□□□□□ -1.97
CDK11AQ9UQ88 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDK11AQ9UQ88 SNORD27-201ENST00000363981 72 ntBASIC2.72□□□□□ -1.97
CDK11AQ9UQ88 Y_RNA.217-201ENST00000364214 105 ntBASIC2.72□□□□□ -1.97
CDK11AQ9UQ88 Y_RNA.277-201ENST00000364754 102 ntBASIC2.72□□□□□ -1.97
CDK11AQ9UQ88 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.72□□□□□ -1.97
CDK11AQ9UQ88 RNU6-1289P-201ENST00000384431 106 ntBASIC2.72□□□□□ -1.97
CDK11AQ9UQ88 MIR520G-201ENST00000385064 90 ntBASIC2.72□□□□□ -1.97
CDK11AQ9UQ88 Y_RNA.641-201ENST00000459414 105 ntBASIC2.72□□□□□ -1.97
CDK11AQ9UQ88 RPS26P45-201ENST00000471748 340 ntBASIC2.72□□□□□ -1.97
CDK11AQ9UQ88 AC008834.1-201ENST00000511612 175 ntBASIC2.72□□□□□ -1.97
CDK11AQ9UQ88 RNU6-63P-201ENST00000516690 95 ntBASIC2.72□□□□□ -1.97
CDK11AQ9UQ88 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.72□□□□□ -1.97
CDK11AQ9UQ88 AC004832.4-201ENST00000608952 331 ntBASIC2.72□□□□□ -1.97
CDK11AQ9UQ88 AC068647.2-201ENST00000637380 353 ntBASIC2.72□□□□□ -1.97
CDK11AQ9UQ88 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.97
CDK11AQ9UQ88 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDK11AQ9UQ88 RNU6-1272P-201ENST00000362776 107 ntBASIC2.71□□□□□ -1.98
CDK11AQ9UQ88 RNU6-801P-201ENST00000364087 105 ntBASIC2.71□□□□□ -1.98
CDK11AQ9UQ88 SNORA16.1-201ENST00000364597 132 ntBASIC2.71□□□□□ -1.98
CDK11AQ9UQ88 RNU6-740P-201ENST00000364734 105 ntBASIC2.71□□□□□ -1.98
CDK11AQ9UQ88 SNORD116-13-201ENST00000384408 92 ntBASIC2.71□□□□□ -1.98
CDK11AQ9UQ88 Y_RNA.590-201ENST00000410140 107 ntBASIC2.71□□□□□ -1.98
CDK11AQ9UQ88 RNA5SP511-201ENST00000410487 115 ntBASIC2.71□□□□□ -1.98
CDK11AQ9UQ88 RN7SL274P-201ENST00000492268 272 ntBASIC2.71□□□□□ -1.98
CDK11AQ9UQ88 AL163195.1-201ENST00000496941 348 ntBASIC2.71□□□□□ -1.98
CDK11AQ9UQ88 Y_RNA.679-201ENST00000516416 91 ntBASIC2.71□□□□□ -1.98
CDK11AQ9UQ88 RNU7-128P-201ENST00000517247 62 ntBASIC2.71□□□□□ -1.98
CDK11AQ9UQ88 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.71□□□□□ -1.98
CDK11AQ9UQ88 MIR4303-201ENST00000581299 66 ntBASIC2.71□□□□□ -1.98
CDK11AQ9UQ88 AL359821.1-201ENST00000605519 182 ntBASIC2.71□□□□□ -1.98
CDK11AQ9UQ88 U6.108-201ENST00000637764 58 ntBASIC2.71□□□□□ -1.98
CDK11AQ9UQ88 AC018630.2-201ENST00000534866 2403 ntBASIC2.71□□□□□ -1.98
CDK11AQ9UQ88 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 MIR337-201ENST00000362281 93 ntBASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 Y_RNA.82-201ENST00000363000 102 ntBASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 Y_RNA.92-201ENST00000363043 102 ntBASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 SNORA33-201ENST00000363664 130 ntBASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 RNU6-899P-201ENST00000363947 107 ntBASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 Y_RNA.235-201ENST00000364412 102 ntBASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 Y_RNA.306-201ENST00000365015 102 ntBASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 Y_RNA.312-201ENST00000365089 102 ntBASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 Y_RNA.322-201ENST00000365151 102 ntBASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 RNU6-1323P-201ENST00000384025 107 ntBASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 SNORA72.4-201ENST00000384174 132 ntBASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 SUMO2P12-201ENST00000405924 140 ntBASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 BTF3P11-201ENST00000426582 477 ntBASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 Y_RNA.650-201ENST00000459002 102 ntBASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 Y_RNA.777-201ENST00000516982 102 ntBASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 AC084364.2-201ENST00000546924 395 ntBASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 AC015720.1-201ENST00000565251 277 ntBASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 Y_RNA.771-201ENST00000598668 102 ntBASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 Y_RNA.789-201ENST00000622480 102 ntBASIC2.7□□□□□ -1.98
CDK11AQ9UQ88 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDK11AQ9UQ88 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
CDK11AQ9UQ88 Y_RNA.60-201ENST00000362831 98 ntBASIC2.69□□□□□ -1.98
CDK11AQ9UQ88 RNY1P10-201ENST00000363268 113 ntBASIC2.69□□□□□ -1.98
CDK11AQ9UQ88 Y_RNA.172-201ENST00000363765 102 ntBASIC2.69□□□□□ -1.98
CDK11AQ9UQ88 RNU6-136P-201ENST00000384663 107 ntBASIC2.69□□□□□ -1.98
CDK11AQ9UQ88 MIR30A-201ENST00000385092 71 ntBASIC2.69□□□□□ -1.98
CDK11AQ9UQ88 MTND1P19-201ENST00000511780 315 ntBASIC2.69□□□□□ -1.98
CDK11AQ9UQ88 DNAJC19P9-201ENST00000555084 351 ntBASIC2.69□□□□□ -1.98
CDK11AQ9UQ88 MIR6079-201ENST00000635807 62 ntBASIC2.69□□□□□ -1.98
CDK11AQ9UQ88 RNU6-763P-201ENST00000390865 106 ntBASIC2.68□□□□□ -1.98
CDK11AQ9UQ88 AL135790.2-201ENST00000437701 267 ntBASIC2.68□□□□□ -1.98
CDK11AQ9UQ88 U8.19-201ENST00000459095 133 ntBASIC2.68□□□□□ -1.98
CDK11AQ9UQ88 Y_RNA.680-201ENST00000516441 93 ntBASIC2.68□□□□□ -1.98
CDK11AQ9UQ88 SNORA31.17-201ENST00000516953 127 ntBASIC2.68□□□□□ -1.98
CDK11AQ9UQ88 MIR548AY-201ENST00000617669 107 ntBASIC2.68□□□□□ -1.98
CDK11AQ9UQ88 Y_RNA.117-201ENST00000363294 101 ntBASIC2.67□□□□□ -1.98
CDK11AQ9UQ88 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.67□□□□□ -1.98
CDK11AQ9UQ88 RPL31P63-201ENST00000422565 375 ntBASIC2.67□□□□□ -1.98
CDK11AQ9UQ88 AC104332.1-201ENST00000440471 797 ntBASIC2.67□□□□□ -1.98
CDK11AQ9UQ88 RNU4-71P-201ENST00000516258 113 ntBASIC2.67□□□□□ -1.98
CDK11AQ9UQ88 RNU7-115P-201ENST00000516433 55 ntBASIC2.67□□□□□ -1.98
CDK11AQ9UQ88 RNU6-341P-201ENST00000516973 96 ntBASIC2.67□□□□□ -1.98
CDK11AQ9UQ88 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.67□□□□□ -1.98
CDK11AQ9UQ88 POLR3GP1-201ENST00000594073 261 ntBASIC2.67□□□□□ -1.98
CDK11AQ9UQ88 AP003357.1-201ENST00000604497 148 ntBASIC2.67□□□□□ -1.98
CDK11AQ9UQ88 snoU18.1-201ENST00000629629 71 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms