Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 uc_338.6-201ENST00000613544 171 ntBASIC-0.5□□□□□ -2.49
VPS29Q9UBQ0 SNORA63C-201ENST00000364578 129 ntBASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 MIR329-1-201ENST00000385028 80 ntBASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 U8.17-201ENST00000391292 132 ntBASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 MIR1257-201ENST00000408490 117 ntBASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 RNU6-469P-201ENST00000516253 101 ntBASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 RNU6-759P-201ENST00000516740 103 ntBASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 MTCO2P4-201ENST00000517968 247 ntBASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 AC018448.1-201ENST00000552843 316 ntBASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 AC090617.3-201ENST00000573670 475 ntBASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 MIR5696-201ENST00000578474 85 ntBASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 AC109347.2-201ENST00000610220 349 ntBASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 Pinc.1-201ENST00000616452 154 ntBASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 AC023510.2-201ENST00000622162 746 ntBASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 MIR499B-201ENST00000636498 73 ntBASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 MIR3674-201ENST00000636576 68 ntBASIC-0.51□□□□□ -2.49
VPS29Q9UBQ0 AC010332.2-201ENST00000613083 1904 ntBASIC-0.52□□□□□ -2.49
VPS29Q9UBQ0 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.52□□□□□ -2.49
VPS29Q9UBQ0 SNORD114-12-201ENST00000365400 75 ntBASIC-0.52□□□□□ -2.49
VPS29Q9UBQ0 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.52□□□□□ -2.49
VPS29Q9UBQ0 RNU6-925P-201ENST00000384629 104 ntBASIC-0.52□□□□□ -2.49
VPS29Q9UBQ0 MIR517A-201ENST00000385001 87 ntBASIC-0.52□□□□□ -2.49
VPS29Q9UBQ0 PDCL2P1-201ENST00000419302 352 ntBASIC-0.52□□□□□ -2.49
VPS29Q9UBQ0 USMG5P1-201ENST00000425964 177 ntBASIC-0.52□□□□□ -2.49
VPS29Q9UBQ0 MTND1P27-201ENST00000451117 902 ntBASIC-0.52□□□□□ -2.49
VPS29Q9UBQ0 MIR18B-201ENST00000454574 71 ntBASIC-0.52□□□□□ -2.49
VPS29Q9UBQ0 RNU6-848P-201ENST00000515948 107 ntBASIC-0.52□□□□□ -2.49
VPS29Q9UBQ0 RNU6-617P-201ENST00000516147 107 ntBASIC-0.52□□□□□ -2.49
VPS29Q9UBQ0 RNU6-473P-201ENST00000516164 107 ntBASIC-0.52□□□□□ -2.49
VPS29Q9UBQ0 RNU6-830P-201ENST00000516353 107 ntBASIC-0.52□□□□□ -2.49
VPS29Q9UBQ0 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.52□□□□□ -2.49
VPS29Q9UBQ0 RNU7-156P-201ENST00000517214 74 ntBASIC-0.52□□□□□ -2.49
VPS29Q9UBQ0 AC060788.1-201ENST00000521318 469 ntBASIC-0.52□□□□□ -2.49
VPS29Q9UBQ0 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.52□□□□□ -2.49
VPS29Q9UBQ0 AC121333.1-201ENST00000567488 2709 ntBASIC-0.52□□□□□ -2.49
VPS29Q9UBQ0 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.53□□□□□ -2.49
VPS29Q9UBQ0 RNA5SP475-201ENST00000410568 110 ntBASIC-0.53□□□□□ -2.49
VPS29Q9UBQ0 MTND2P18-201ENST00000419962 1030 ntBASIC-0.53□□□□□ -2.49
VPS29Q9UBQ0 MTCO2P27-201ENST00000420740 428 ntBASIC-0.53□□□□□ -2.49
VPS29Q9UBQ0 AL353193.1-201ENST00000421444 268 ntBASIC-0.53□□□□□ -2.49
VPS29Q9UBQ0 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.53□□□□□ -2.49
VPS29Q9UBQ0 AL512326.2-201ENST00000426359 151 ntBASIC-0.53□□□□□ -2.49
VPS29Q9UBQ0 MTCO2P19-201ENST00000427513 598 ntBASIC-0.53□□□□□ -2.49
VPS29Q9UBQ0 U8.19-201ENST00000459095 133 ntBASIC-0.53□□□□□ -2.49
VPS29Q9UBQ0 U8.22-201ENST00000459141 133 ntBASIC-0.53□□□□□ -2.49
VPS29Q9UBQ0 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.53□□□□□ -2.49
VPS29Q9UBQ0 SCARNA8-201ENST00000515924 131 ntBASIC-0.53□□□□□ -2.49
VPS29Q9UBQ0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.53□□□□□ -2.49
VPS29Q9UBQ0 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.53□□□□□ -2.49
VPS29Q9UBQ0 SNORD38B-202ENST00000625943 69 ntBASIC-0.53□□□□□ -2.49
VPS29Q9UBQ0 SNORA18.1-201ENST00000363418 128 ntBASIC-0.54□□□□□ -2.5
VPS29Q9UBQ0 RNA5SP457-201ENST00000363657 124 ntBASIC-0.54□□□□□ -2.5
VPS29Q9UBQ0 RNA5SP275-201ENST00000363936 118 ntBASIC-0.54□□□□□ -2.5
VPS29Q9UBQ0 RNU6-95P-201ENST00000384697 107 ntBASIC-0.54□□□□□ -2.5
VPS29Q9UBQ0 RNU7-165P-201ENST00000458864 60 ntBASIC-0.54□□□□□ -2.5
VPS29Q9UBQ0 RNU7-185P-201ENST00000459215 60 ntBASIC-0.54□□□□□ -2.5
VPS29Q9UBQ0 AC091959.1-201ENST00000495857 238 ntBASIC-0.54□□□□□ -2.5
VPS29Q9UBQ0 RNU6-782P-201ENST00000516852 104 ntBASIC-0.54□□□□□ -2.5
VPS29Q9UBQ0 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.54□□□□□ -2.5
VPS29Q9UBQ0 MIR106A-201ENST00000384870 81 ntBASIC-0.55□□□□□ -2.5
VPS29Q9UBQ0 MIR802-201ENST00000390235 94 ntBASIC-0.55□□□□□ -2.5
VPS29Q9UBQ0 RNU6-269P-201ENST00000391077 97 ntBASIC-0.55□□□□□ -2.5
VPS29Q9UBQ0 SNORA26.5-201ENST00000391215 123 ntBASIC-0.55□□□□□ -2.5
VPS29Q9UBQ0 SNORA26-201ENST00000391286 122 ntBASIC-0.55□□□□□ -2.5
VPS29Q9UBQ0 AC096531.1-201ENST00000419107 107 ntBASIC-0.55□□□□□ -2.5
VPS29Q9UBQ0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.55□□□□□ -2.5
VPS29Q9UBQ0 MTATP6P13-201ENST00000438531 667 ntBASIC-0.55□□□□□ -2.5
VPS29Q9UBQ0 RNU6-625P-201ENST00000459412 107 ntBASIC-0.55□□□□□ -2.5
VPS29Q9UBQ0 RNU7-181P-201ENST00000517234 74 ntBASIC-0.55□□□□□ -2.5
VPS29Q9UBQ0 AC092447.9-201ENST00000603395 144 ntBASIC-0.55□□□□□ -2.5
VPS29Q9UBQ0 AL670379.3-201ENST00000605040 251 ntBASIC-0.55□□□□□ -2.5
VPS29Q9UBQ0 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.56□□□□□ -2.5
VPS29Q9UBQ0 SNORA1.1-201ENST00000364671 133 ntBASIC-0.56□□□□□ -2.5
VPS29Q9UBQ0 SNORA1.2-201ENST00000365189 134 ntBASIC-0.56□□□□□ -2.5
VPS29Q9UBQ0 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.56□□□□□ -2.5
VPS29Q9UBQ0 MT-TH-201ENST00000387441 69 ntBASIC-0.56□□□□□ -2.5
VPS29Q9UBQ0 AC090844.1-201ENST00000422019 156 ntBASIC-0.56□□□□□ -2.5
VPS29Q9UBQ0 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-0.56□□□□□ -2.5
VPS29Q9UBQ0 MTND1P11-201ENST00000456661 876 ntBASIC-0.56□□□□□ -2.5
VPS29Q9UBQ0 AC005972.2-201ENST00000604690 348 ntBASIC-0.56□□□□□ -2.5
VPS29Q9UBQ0 AC092954.2-201ENST00000609103 430 ntBASIC-0.56□□□□□ -2.5
VPS29Q9UBQ0 AC007494.3-201ENST00000624660 743 ntBASIC-0.56□□□□□ -2.5
VPS29Q9UBQ0 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.57□□□□□ -2.5
VPS29Q9UBQ0 RNU6-1103P-201ENST00000384150 107 ntBASIC-0.57□□□□□ -2.5
VPS29Q9UBQ0 RNU6-847P-201ENST00000411115 108 ntBASIC-0.57□□□□□ -2.5
VPS29Q9UBQ0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.57□□□□□ -2.5
VPS29Q9UBQ0 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.57□□□□□ -2.5
VPS29Q9UBQ0 EIF1P2-201ENST00000428233 350 ntBASIC-0.57□□□□□ -2.5
VPS29Q9UBQ0 AL031667.1-201ENST00000440222 725 ntBASIC-0.57□□□□□ -2.5
VPS29Q9UBQ0 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.57□□□□□ -2.5
VPS29Q9UBQ0 AC083904.1-201ENST00000487828 231 ntBASIC-0.57□□□□□ -2.5
VPS29Q9UBQ0 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.57□□□□□ -2.5
VPS29Q9UBQ0 MIR3915-201ENST00000578518 97 ntBASIC-0.57□□□□□ -2.5
VPS29Q9UBQ0 MIR6740-201ENST00000618268 113 ntBASIC-0.57□□□□□ -2.5
VPS29Q9UBQ0 MIR7111-201ENST00000619751 72 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms