Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MIR598-201ENST00000384868 97 ntBASIC0.04□□□□□ -2.4
VAPAQ9P0L0 RNU6-205P-201ENST00000390858 107 ntBASIC0.04□□□□□ -2.4
VAPAQ9P0L0 SNORA40.8-201ENST00000411034 126 ntBASIC0.04□□□□□ -2.4
VAPAQ9P0L0 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.04□□□□□ -2.4
VAPAQ9P0L0 AL353997.1-201ENST00000432936 108 ntBASIC0.04□□□□□ -2.4
VAPAQ9P0L0 Y_RNA.714-201ENST00000517065 90 ntBASIC0.04□□□□□ -2.4
VAPAQ9P0L0 OSBPL9P5-201ENST00000542581 171 ntBASIC0.04□□□□□ -2.4
VAPAQ9P0L0 MIR4514-201ENST00000581410 57 ntBASIC0.04□□□□□ -2.4
VAPAQ9P0L0 AC004467.1-201ENST00000615678 330 ntBASIC0.04□□□□□ -2.4
VAPAQ9P0L0 Y_RNA.172-201ENST00000363765 102 ntBASIC0.03□□□□□ -2.4
VAPAQ9P0L0 SNORD45.3-201ENST00000363836 72 ntBASIC0.03□□□□□ -2.4
VAPAQ9P0L0 SNORD14E-201ENST00000364009 85 ntBASIC0.03□□□□□ -2.4
VAPAQ9P0L0 SNORD116-8-201ENST00000384365 95 ntBASIC0.03□□□□□ -2.4
VAPAQ9P0L0 SNORD38C-201ENST00000384381 69 ntBASIC0.03□□□□□ -2.4
VAPAQ9P0L0 RNU2-66P-201ENST00000410650 161 ntBASIC0.03□□□□□ -2.4
VAPAQ9P0L0 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.03□□□□□ -2.4
VAPAQ9P0L0 RNU2-12P-201ENST00000517216 168 ntBASIC0.03□□□□□ -2.4
VAPAQ9P0L0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.03□□□□□ -2.4
VAPAQ9P0L0 AC005972.2-201ENST00000604690 348 ntBASIC0.03□□□□□ -2.4
VAPAQ9P0L0 AC005014.2-201ENST00000607795 599 ntBASIC0.03□□□□□ -2.4
VAPAQ9P0L0 RNY1-201ENST00000364228 113 ntBASIC0.02□□□□□ -2.41
VAPAQ9P0L0 RNU6-580P-201ENST00000365159 107 ntBASIC0.02□□□□□ -2.41
VAPAQ9P0L0 Y_RNA.358-201ENST00000365491 99 ntBASIC0.02□□□□□ -2.41
VAPAQ9P0L0 SNORA51.10-201ENST00000384418 136 ntBASIC0.02□□□□□ -2.41
VAPAQ9P0L0 MTCO2P33-201ENST00000402100 465 ntBASIC0.02□□□□□ -2.41
VAPAQ9P0L0 AL031003.1-201ENST00000404229 172 ntBASIC0.02□□□□□ -2.41
VAPAQ9P0L0 MTCO2P27-201ENST00000420740 428 ntBASIC0.02□□□□□ -2.41
VAPAQ9P0L0 AC073261.1-201ENST00000429409 121 ntBASIC0.02□□□□□ -2.41
VAPAQ9P0L0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.02□□□□□ -2.41
VAPAQ9P0L0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.02□□□□□ -2.41
VAPAQ9P0L0 SNORD5.1-201ENST00000458800 75 ntBASIC0.02□□□□□ -2.41
VAPAQ9P0L0 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.02□□□□□ -2.41
VAPAQ9P0L0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.02□□□□□ -2.41
VAPAQ9P0L0 RNU6-408P-201ENST00000515910 100 ntBASIC0.02□□□□□ -2.41
VAPAQ9P0L0 RNU6-1088P-201ENST00000516850 104 ntBASIC0.02□□□□□ -2.41
VAPAQ9P0L0 AC105029.1-201ENST00000520250 669 ntBASIC0.02□□□□□ -2.41
VAPAQ9P0L0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.02□□□□□ -2.41
VAPAQ9P0L0 MIR4804-201ENST00000581683 73 ntBASIC0.02□□□□□ -2.41
VAPAQ9P0L0 AP000753.3-201ENST00000604083 169 ntBASIC0.02□□□□□ -2.41
VAPAQ9P0L0 MIR6718-201ENST00000616153 80 ntBASIC0.02□□□□□ -2.41
VAPAQ9P0L0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.01□□□□□ -2.41
VAPAQ9P0L0 RNU4-67P-201ENST00000364569 141 ntBASIC0.01□□□□□ -2.41
VAPAQ9P0L0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
VAPAQ9P0L0 SNORD12B-201ENST00000410433 91 ntBASIC0.01□□□□□ -2.41
VAPAQ9P0L0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.01□□□□□ -2.41
VAPAQ9P0L0 RNU6-864P-201ENST00000516256 108 ntBASIC0.01□□□□□ -2.41
VAPAQ9P0L0 RNU4-77P-201ENST00000516692 156 ntBASIC0.01□□□□□ -2.41
VAPAQ9P0L0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.01□□□□□ -2.41
VAPAQ9P0L0 AC006380.1-201ENST00000603598 186 ntBASIC0.01□□□□□ -2.41
VAPAQ9P0L0 LARP7P1-201ENST00000605576 316 ntBASIC0.01□□□□□ -2.41
VAPAQ9P0L0 SNORA25.18-201ENST00000607153 114 ntBASIC0.01□□□□□ -2.41
VAPAQ9P0L0 Z99129.1-201ENST00000612510 255 ntBASIC0.01□□□□□ -2.41
VAPAQ9P0L0 AC007742.2-201ENST00000618226 398 ntBASIC0.01□□□□□ -2.41
VAPAQ9P0L0 AC090617.10-201ENST00000624308 134 ntBASIC0.01□□□□□ -2.41
VAPAQ9P0L0 MIR377-201ENST00000362145 69 ntBASIC0□□□□□ -2.41
VAPAQ9P0L0 Y_RNA.269-201ENST00000364685 89 ntBASIC0□□□□□ -2.41
VAPAQ9P0L0 RNU6-815P-201ENST00000384080 113 ntBASIC0□□□□□ -2.41
VAPAQ9P0L0 MT-TN-201ENST00000387400 73 ntBASIC0□□□□□ -2.41
VAPAQ9P0L0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0□□□□□ -2.41
VAPAQ9P0L0 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0□□□□□ -2.41
VAPAQ9P0L0 U8.19-201ENST00000459095 133 ntBASIC0□□□□□ -2.41
VAPAQ9P0L0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0□□□□□ -2.41
VAPAQ9P0L0 AC093534.1-201ENST00000504977 132 ntBASIC0□□□□□ -2.41
VAPAQ9P0L0 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
VAPAQ9P0L0 MIR4676-201ENST00000583078 72 ntBASIC0□□□□□ -2.41
VAPAQ9P0L0 PVT1_3.1-201ENST00000620853 95 ntBASIC0□□□□□ -2.41
VAPAQ9P0L0 IST1-227ENST00000626438 126 ntTSL 5 BASIC0□□□□□ -2.41
VAPAQ9P0L0 MIR3662-201ENST00000637030 95 ntBASIC0□□□□□ -2.41
VAPAQ9P0L0 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.01□□□□□ -2.41
VAPAQ9P0L0 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.01□□□□□ -2.41
VAPAQ9P0L0 U8.17-201ENST00000391292 132 ntBASIC-0.01□□□□□ -2.41
VAPAQ9P0L0 MTND1P17-201ENST00000448961 204 ntBASIC-0.01□□□□□ -2.41
VAPAQ9P0L0 RNU7-56P-201ENST00000458744 62 ntBASIC-0.01□□□□□ -2.41
VAPAQ9P0L0 snoU13.18-201ENST00000459483 104 ntBASIC-0.01□□□□□ -2.41
VAPAQ9P0L0 HMGN1P10-201ENST00000474557 553 ntBASIC-0.01□□□□□ -2.41
VAPAQ9P0L0 AC116353.2-201ENST00000505332 712 ntBASIC-0.01□□□□□ -2.41
VAPAQ9P0L0 RNA5SP94-201ENST00000516917 108 ntBASIC-0.01□□□□□ -2.41
VAPAQ9P0L0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.01□□□□□ -2.41
VAPAQ9P0L0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.01□□□□□ -2.41
VAPAQ9P0L0 AC055872.1-201ENST00000570978 278 ntBASIC-0.01□□□□□ -2.41
VAPAQ9P0L0 Pinc.1-201ENST00000616452 154 ntBASIC-0.01□□□□□ -2.41
VAPAQ9P0L0 MTND1P7-201ENST00000632801 297 ntBASIC-0.01□□□□□ -2.41
VAPAQ9P0L0 MIR4315-1-201ENST00000636800 73 ntBASIC-0.01□□□□□ -2.41
VAPAQ9P0L0 AC010487.4-201ENST00000637027 61 ntBASIC-0.01□□□□□ -2.41
VAPAQ9P0L0 MIR3974-201ENST00000637126 96 ntBASIC-0.01□□□□□ -2.41
VAPAQ9P0L0 AC024614.3-201ENST00000637860 256 ntBASIC-0.01□□□□□ -2.41
VAPAQ9P0L0 MIR4315-2-201ENST00000640925 73 ntBASIC-0.01□□□□□ -2.41
VAPAQ9P0L0 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.02□□□□□ -2.41
VAPAQ9P0L0 SNORA72-201ENST00000384339 132 ntBASIC-0.02□□□□□ -2.41
VAPAQ9P0L0 MTND4LP16-201ENST00000440828 295 ntBASIC-0.02□□□□□ -2.41
VAPAQ9P0L0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.02□□□□□ -2.41
VAPAQ9P0L0 RNU6-566P-201ENST00000516790 107 ntBASIC-0.02□□□□□ -2.41
VAPAQ9P0L0 AC069113.3-201ENST00000521019 150 ntBASIC-0.02□□□□□ -2.41
VAPAQ9P0L0 AC018638.8-201ENST00000588755 281 ntBASIC-0.02□□□□□ -2.41
VAPAQ9P0L0 AC020891.4-201ENST00000605745 93 ntBASIC-0.02□□□□□ -2.41
VAPAQ9P0L0 AC240442.1-201ENST00000616055 283 ntBASIC-0.02□□□□□ -2.41
VAPAQ9P0L0 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.02□□□□□ -2.41
VAPAQ9P0L0 MIR1321-201ENST00000637766 79 ntBASIC-0.02□□□□□ -2.41
VAPAQ9P0L0 MIR411-201ENST00000362239 96 ntBASIC-0.03□□□□□ -2.41
VAPAQ9P0L0 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms