Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 AC010424.1-201ENST00000506336 297 ntBASIC-0.05□□□□□ -2.42
MED28Q9H204 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.05□□□□□ -2.42
MED28Q9H204 MIR3942-201ENST00000585264 109 ntBASIC-0.05□□□□□ -2.42
MED28Q9H204 AC020891.4-201ENST00000605745 93 ntBASIC-0.05□□□□□ -2.42
MED28Q9H204 SNORA25.18-201ENST00000607153 114 ntBASIC-0.05□□□□□ -2.42
MED28Q9H204 MIR371B-201ENST00000638082 66 ntBASIC-0.05□□□□□ -2.42
MED28Q9H204 SNORA42.1-201ENST00000363515 137 ntBASIC-0.06□□□□□ -2.42
MED28Q9H204 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.06□□□□□ -2.42
MED28Q9H204 SNORD114-9-201ENST00000364370 72 ntBASIC-0.06□□□□□ -2.42
MED28Q9H204 RNU6-483P-201ENST00000384088 108 ntBASIC-0.06□□□□□ -2.42
MED28Q9H204 SNORD38C-201ENST00000384381 69 ntBASIC-0.06□□□□□ -2.42
MED28Q9H204 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
MED28Q9H204 RNU6-332P-201ENST00000391193 108 ntBASIC-0.06□□□□□ -2.42
MED28Q9H204 SNORD100-201ENST00000408573 76 ntBASIC-0.06□□□□□ -2.42
MED28Q9H204 AL353997.1-201ENST00000432936 108 ntBASIC-0.06□□□□□ -2.42
MED28Q9H204 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.06□□□□□ -2.42
MED28Q9H204 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.06□□□□□ -2.42
MED28Q9H204 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.06□□□□□ -2.42
MED28Q9H204 AC093534.1-201ENST00000504977 132 ntBASIC-0.06□□□□□ -2.42
MED28Q9H204 RNU6-830P-201ENST00000516353 107 ntBASIC-0.06□□□□□ -2.42
MED28Q9H204 NBR2-204ENST00000587322 63 ntBASIC-0.06□□□□□ -2.42
MED28Q9H204 AP000753.3-201ENST00000604083 169 ntBASIC-0.06□□□□□ -2.42
MED28Q9H204 SNORD14E-201ENST00000364009 85 ntBASIC-0.07□□□□□ -2.42
MED28Q9H204 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.07□□□□□ -2.42
MED28Q9H204 RNU6-780P-201ENST00000391030 104 ntBASIC-0.07□□□□□ -2.42
MED28Q9H204 U8.17-201ENST00000391292 132 ntBASIC-0.07□□□□□ -2.42
MED28Q9H204 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.07□□□□□ -2.42
MED28Q9H204 AC019235.1-201ENST00000503847 207 ntBASIC-0.07□□□□□ -2.42
MED28Q9H204 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.07□□□□□ -2.42
MED28Q9H204 AC105029.1-201ENST00000520250 669 ntBASIC-0.07□□□□□ -2.42
MED28Q9H204 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.07□□□□□ -2.42
MED28Q9H204 SNORA4-201ENST00000584302 138 ntBASIC-0.07□□□□□ -2.42
MED28Q9H204 MIR4760-201ENST00000585040 80 ntBASIC-0.07□□□□□ -2.42
MED28Q9H204 AC005972.2-201ENST00000604690 348 ntBASIC-0.07□□□□□ -2.42
MED28Q9H204 AC005014.2-201ENST00000607795 599 ntBASIC-0.07□□□□□ -2.42
MED28Q9H204 AC004467.1-201ENST00000615678 330 ntBASIC-0.07□□□□□ -2.42
MED28Q9H204 MIR6718-201ENST00000616153 80 ntBASIC-0.07□□□□□ -2.42
MED28Q9H204 Pinc.1-201ENST00000616452 154 ntBASIC-0.07□□□□□ -2.42
MED28Q9H204 uc_338.16-201ENST00000621804 95 ntBASIC-0.07□□□□□ -2.42
MED28Q9H204 MTND1P7-201ENST00000632801 297 ntBASIC-0.07□□□□□ -2.42
MED28Q9H204 AC090582.1-201ENST00000636321 199 ntBASIC-0.07□□□□□ -2.42
MED28Q9H204 RNU6-451P-201ENST00000362921 107 ntBASIC-0.08□□□□□ -2.42
MED28Q9H204 RNA5SP214-201ENST00000363378 118 ntBASIC-0.08□□□□□ -2.42
MED28Q9H204 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.08□□□□□ -2.42
MED28Q9H204 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.08□□□□□ -2.42
MED28Q9H204 RNU6-259P-201ENST00000383999 107 ntBASIC-0.08□□□□□ -2.42
MED28Q9H204 SNORA72-201ENST00000384339 132 ntBASIC-0.08□□□□□ -2.42
MED28Q9H204 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.08□□□□□ -2.42
MED28Q9H204 RNU6-700P-201ENST00000391043 107 ntBASIC-0.08□□□□□ -2.42
MED28Q9H204 MTCO2P33-201ENST00000402100 465 ntBASIC-0.08□□□□□ -2.42
MED28Q9H204 AL031003.1-201ENST00000404229 172 ntBASIC-0.08□□□□□ -2.42
MED28Q9H204 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.08□□□□□ -2.42
MED28Q9H204 SNORD5.1-201ENST00000458800 75 ntBASIC-0.08□□□□□ -2.42
MED28Q9H204 HMGN1P10-201ENST00000474557 553 ntBASIC-0.08□□□□□ -2.42
MED28Q9H204 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.08□□□□□ -2.42
MED28Q9H204 RNU1-54P-201ENST00000517181 120 ntBASIC-0.08□□□□□ -2.42
MED28Q9H204 AC112693.2-201ENST00000556538 232 ntBASIC-0.08□□□□□ -2.42
MED28Q9H204 MIR4667-201ENST00000578933 66 ntBASIC-0.08□□□□□ -2.42
MED28Q9H204 MIR4264-201ENST00000583520 66 ntBASIC-0.08□□□□□ -2.42
MED28Q9H204 MIR6734-201ENST00000621166 68 ntBASIC-0.08□□□□□ -2.42
MED28Q9H204 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
MED28Q9H204 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.09□□□□□ -2.42
MED28Q9H204 SNORA8.2-201ENST00000384372 139 ntBASIC-0.09□□□□□ -2.42
MED28Q9H204 RNU6-125P-201ENST00000384505 107 ntBASIC-0.09□□□□□ -2.42
MED28Q9H204 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
MED28Q9H204 MIR938-201ENST00000401216 83 ntBASIC-0.09□□□□□ -2.42
MED28Q9H204 MIR1287-201ENST00000408492 90 ntBASIC-0.09□□□□□ -2.42
MED28Q9H204 RNU2-70P-201ENST00000410718 179 ntBASIC-0.09□□□□□ -2.42
MED28Q9H204 RNU2-61P-201ENST00000411069 191 ntBASIC-0.09□□□□□ -2.42
MED28Q9H204 Y_RNA.717-201ENST00000517106 92 ntBASIC-0.09□□□□□ -2.42
MED28Q9H204 AC055872.1-201ENST00000570978 278 ntBASIC-0.09□□□□□ -2.42
MED28Q9H204 MIR4791-201ENST00000607666 84 ntBASIC-0.09□□□□□ -2.42
MED28Q9H204 AC240442.1-201ENST00000616055 283 ntBASIC-0.09□□□□□ -2.42
MED28Q9H204 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.09□□□□□ -2.42
MED28Q9H204 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.09□□□□□ -2.42
MED28Q9H204 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.1□□□□□ -2.43
MED28Q9H204 RNY3P3-201ENST00000363816 102 ntBASIC-0.1□□□□□ -2.43
MED28Q9H204 MIR598-201ENST00000384868 97 ntBASIC-0.1□□□□□ -2.43
MED28Q9H204 SNORA75.6-201ENST00000391318 127 ntBASIC-0.1□□□□□ -2.43
MED28Q9H204 SNORD12B-201ENST00000410433 91 ntBASIC-0.1□□□□□ -2.43
MED28Q9H204 MTND2P9-201ENST00000422293 931 ntBASIC-0.1□□□□□ -2.43
MED28Q9H204 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.1□□□□□ -2.43
MED28Q9H204 SNRPGP14-201ENST00000435400 219 ntBASIC-0.1□□□□□ -2.43
MED28Q9H204 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.1□□□□□ -2.43
MED28Q9H204 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.1□□□□□ -2.43
MED28Q9H204 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.1□□□□□ -2.43
MED28Q9H204 RNU6-408P-201ENST00000515910 100 ntBASIC-0.1□□□□□ -2.43
MED28Q9H204 RNA5SP227-201ENST00000516184 113 ntBASIC-0.1□□□□□ -2.43
MED28Q9H204 RNU6-864P-201ENST00000516256 108 ntBASIC-0.1□□□□□ -2.43
MED28Q9H204 RNU6-273P-201ENST00000516937 96 ntBASIC-0.1□□□□□ -2.43
MED28Q9H204 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.1□□□□□ -2.43
MED28Q9H204 AC090897.1-201ENST00000580909 226 ntBASIC-0.1□□□□□ -2.43
MED28Q9H204 AC018638.8-201ENST00000588755 281 ntBASIC-0.1□□□□□ -2.43
MED28Q9H204 MIR6128-201ENST00000615528 109 ntBASIC-0.1□□□□□ -2.43
MED28Q9H204 uc_338.4-201ENST00000616635 176 ntBASIC-0.1□□□□□ -2.43
MED28Q9H204 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.11□□□□□ -2.43
MED28Q9H204 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.11□□□□□ -2.43
MED28Q9H204 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
MED28Q9H204 BTF3P11-201ENST00000426582 477 ntBASIC-0.11□□□□□ -2.43
MED28Q9H204 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms