Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 MIR6128-201ENST00000615528 109 ntBASIC-0.07□□□□□ -2.42
NKX6-2Q9C056 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.07□□□□□ -2.42
NKX6-2Q9C056 MTND1P7-201ENST00000632801 297 ntBASIC-0.07□□□□□ -2.42
NKX6-2Q9C056 MIR411-201ENST00000362239 96 ntBASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 SNORD114-16-201ENST00000363044 70 ntBASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 SNORA42.1-201ENST00000363515 137 ntBASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 RNU6-767P-201ENST00000384132 107 ntBASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 RNU6-42P-201ENST00000384165 107 ntBASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 BTF3P11-201ENST00000426582 477 ntBASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 RNU7-56P-201ENST00000458744 62 ntBASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 Y_RNA.717-201ENST00000517106 92 ntBASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 RNU7-181P-201ENST00000517234 74 ntBASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 AC112693.2-201ENST00000556538 232 ntBASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 AC055872.1-201ENST00000570978 278 ntBASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 MIR4264-201ENST00000583520 66 ntBASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 SNORA4-201ENST00000584302 138 ntBASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 AC004467.1-201ENST00000615678 330 ntBASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 AC124864.2-201ENST00000624736 186 ntBASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.08□□□□□ -2.42
NKX6-2Q9C056 SNORD114-5-201ENST00000362928 70 ntBASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 RNA5SP214-201ENST00000363378 118 ntBASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 SNORD114-9-201ENST00000364370 72 ntBASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 U8.17-201ENST00000391292 132 ntBASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 SNORD12B-201ENST00000410433 91 ntBASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 RNU6-408P-201ENST00000515910 100 ntBASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 AC105029.1-201ENST00000520250 669 ntBASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 MIR3611-201ENST00000584484 83 ntBASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 MIR4760-201ENST00000585040 80 ntBASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 MIR4768-201ENST00000585270 74 ntBASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 AC018638.8-201ENST00000588755 281 ntBASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 AC008608.1-201ENST00000603910 127 ntBASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 AC104408.1-201ENST00000605241 170 ntBASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 MIR4791-201ENST00000607666 84 ntBASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 uc_338.6-201ENST00000613544 171 ntBASIC-0.09□□□□□ -2.42
NKX6-2Q9C056 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 RNU4-67P-201ENST00000364569 141 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 SNORA72-201ENST00000384339 132 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 MIR802-201ENST00000390235 94 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 SNORA75.6-201ENST00000391318 127 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 MIR938-201ENST00000401216 83 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 SNORD100-201ENST00000408573 76 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 MTND2P9-201ENST00000422293 931 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 SEPT7P4-201ENST00000437076 306 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 RNU7-62P-201ENST00000458856 62 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 AC019235.1-201ENST00000503847 207 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 SNORA18.4-201ENST00000516440 124 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 AC006380.1-201ENST00000603598 186 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 AC240442.1-201ENST00000616055 283 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 MIR6718-201ENST00000616153 80 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 Pinc.1-201ENST00000616452 154 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 AL391262.2-201ENST00000622466 494 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 AC098679.4-201ENST00000624241 654 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 AC090617.10-201ENST00000624308 134 ntBASIC-0.1□□□□□ -2.43
NKX6-2Q9C056 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.11□□□□□ -2.43
NKX6-2Q9C056 RNY3P3-201ENST00000363816 102 ntBASIC-0.11□□□□□ -2.43
NKX6-2Q9C056 RNU6-324P-201ENST00000363957 106 ntBASIC-0.11□□□□□ -2.43
NKX6-2Q9C056 RNU6-442P-201ENST00000383968 104 ntBASIC-0.11□□□□□ -2.43
NKX6-2Q9C056 RNU6-259P-201ENST00000383999 107 ntBASIC-0.11□□□□□ -2.43
NKX6-2Q9C056 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.11□□□□□ -2.43
NKX6-2Q9C056 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.11□□□□□ -2.43
NKX6-2Q9C056 CHEK2P4-201ENST00000450340 246 ntBASIC-0.11□□□□□ -2.43
NKX6-2Q9C056 SNORD5.1-201ENST00000458800 75 ntBASIC-0.11□□□□□ -2.43
NKX6-2Q9C056 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.11□□□□□ -2.43
NKX6-2Q9C056 AC116353.2-201ENST00000505332 712 ntBASIC-0.11□□□□□ -2.43
NKX6-2Q9C056 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.11□□□□□ -2.43
NKX6-2Q9C056 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.11□□□□□ -2.43
NKX6-2Q9C056 AP003327.1-201ENST00000529684 127 ntBASIC-0.11□□□□□ -2.43
NKX6-2Q9C056 AC090897.1-201ENST00000580909 226 ntBASIC-0.11□□□□□ -2.43
NKX6-2Q9C056 MIR4514-201ENST00000581410 57 ntBASIC-0.11□□□□□ -2.43
NKX6-2Q9C056 MIR4298-201ENST00000584380 73 ntBASIC-0.11□□□□□ -2.43
NKX6-2Q9C056 NBR2-204ENST00000587322 63 ntBASIC-0.11□□□□□ -2.43
NKX6-2Q9C056 uc_338.4-201ENST00000616635 176 ntBASIC-0.11□□□□□ -2.43
NKX6-2Q9C056 RNU6-961P-201ENST00000363893 105 ntBASIC-0.12□□□□□ -2.43
NKX6-2Q9C056 RNU2-66P-201ENST00000410650 161 ntBASIC-0.12□□□□□ -2.43
NKX6-2Q9C056 RNU2-61P-201ENST00000411069 191 ntBASIC-0.12□□□□□ -2.43
NKX6-2Q9C056 AC090844.1-201ENST00000422019 156 ntBASIC-0.12□□□□□ -2.43
NKX6-2Q9C056 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.12□□□□□ -2.43
NKX6-2Q9C056 RNU7-102P-201ENST00000458948 62 ntBASIC-0.12□□□□□ -2.43
NKX6-2Q9C056 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.12□□□□□ -2.43
NKX6-2Q9C056 RPL23AP91-201ENST00000569211 455 ntBASIC-0.12□□□□□ -2.43
NKX6-2Q9C056 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms