Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MTND2P14-201ENST00000482139 351 ntBASIC-0.42□□□□□ -2.48
TRIM4Q9C037 AC046134.1-201ENST00000514454 666 ntBASIC-0.42□□□□□ -2.48
TRIM4Q9C037 U6.115-201ENST00000636045 103 ntBASIC-0.42□□□□□ -2.48
TRIM4Q9C037 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.42□□□□□ -2.48
TRIM4Q9C037 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.42□□□□□ -2.48
TRIM4Q9C037 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.43□□□□□ -2.48
TRIM4Q9C037 MIR892B-201ENST00000401279 77 ntBASIC-0.43□□□□□ -2.48
TRIM4Q9C037 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-0.43□□□□□ -2.48
TRIM4Q9C037 MLLT10P1-201ENST00000418346 262 ntBASIC-0.43□□□□□ -2.48
TRIM4Q9C037 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.43□□□□□ -2.48
TRIM4Q9C037 SNORD42A-201ENST00000459584 64 ntBASIC-0.43□□□□□ -2.48
TRIM4Q9C037 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.43□□□□□ -2.48
TRIM4Q9C037 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.43□□□□□ -2.48
TRIM4Q9C037 SNORA19.2-201ENST00000516013 114 ntBASIC-0.43□□□□□ -2.48
TRIM4Q9C037 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
TRIM4Q9C037 AC100830.2-201ENST00000581636 240 ntBASIC-0.43□□□□□ -2.48
TRIM4Q9C037 U4.2-201ENST00000618561 85 ntBASIC-0.43□□□□□ -2.48
TRIM4Q9C037 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.43□□□□□ -2.48
TRIM4Q9C037 RNU6-1214P-201ENST00000363650 109 ntBASIC-0.44□□□□□ -2.48
TRIM4Q9C037 RNA5SP205-201ENST00000364653 136 ntBASIC-0.44□□□□□ -2.48
TRIM4Q9C037 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.44□□□□□ -2.48
TRIM4Q9C037 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.44□□□□□ -2.48
TRIM4Q9C037 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.44□□□□□ -2.48
TRIM4Q9C037 MTCO2P33-201ENST00000402100 465 ntBASIC-0.44□□□□□ -2.48
TRIM4Q9C037 MIR548H2-201ENST00000408874 88 ntBASIC-0.44□□□□□ -2.48
TRIM4Q9C037 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.44□□□□□ -2.48
TRIM4Q9C037 HMGN2P32-201ENST00000444648 269 ntBASIC-0.44□□□□□ -2.48
TRIM4Q9C037 AC069271.1-201ENST00000445577 156 ntBASIC-0.44□□□□□ -2.48
TRIM4Q9C037 AC133485.4-201ENST00000561835 220 ntBASIC-0.44□□□□□ -2.48
TRIM4Q9C037 MIR548AZ-201ENST00000616567 95 ntBASIC-0.44□□□□□ -2.48
TRIM4Q9C037 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.45□□□□□ -2.48
TRIM4Q9C037 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.45□□□□□ -2.48
TRIM4Q9C037 RNU6-248P-201ENST00000410720 107 ntBASIC-0.45□□□□□ -2.48
TRIM4Q9C037 RNU7-159P-201ENST00000459284 62 ntBASIC-0.45□□□□□ -2.48
TRIM4Q9C037 RPL17P19-201ENST00000489069 552 ntBASIC-0.45□□□□□ -2.48
TRIM4Q9C037 MTCO2P30-201ENST00000503662 364 ntBASIC-0.45□□□□□ -2.48
TRIM4Q9C037 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.45□□□□□ -2.48
TRIM4Q9C037 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.45□□□□□ -2.48
TRIM4Q9C037 AL118558.2-201ENST00000556294 238 ntBASIC-0.45□□□□□ -2.48
TRIM4Q9C037 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.45□□□□□ -2.48
TRIM4Q9C037 AC010525.2-201ENST00000590920 195 ntBASIC-0.45□□□□□ -2.48
TRIM4Q9C037 AC005828.6-201ENST00000606610 232 ntBASIC-0.45□□□□□ -2.48
TRIM4Q9C037 SNORD113-7-201ENST00000363762 77 ntBASIC-0.46□□□□□ -2.48
TRIM4Q9C037 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.46□□□□□ -2.48
TRIM4Q9C037 RNA5SP117-201ENST00000365294 118 ntBASIC-0.46□□□□□ -2.48
TRIM4Q9C037 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.46□□□□□ -2.48
TRIM4Q9C037 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.46□□□□□ -2.48
TRIM4Q9C037 RNU6-125P-201ENST00000384505 107 ntBASIC-0.46□□□□□ -2.48
TRIM4Q9C037 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.46□□□□□ -2.48
TRIM4Q9C037 MIR106A-201ENST00000384870 81 ntBASIC-0.46□□□□□ -2.48
TRIM4Q9C037 MIR620-201ENST00000385232 95 ntBASIC-0.46□□□□□ -2.48
TRIM4Q9C037 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.46□□□□□ -2.48
TRIM4Q9C037 AC092447.3-201ENST00000426027 686 ntBASIC-0.46□□□□□ -2.48
TRIM4Q9C037 RNU7-102P-201ENST00000458948 62 ntBASIC-0.46□□□□□ -2.48
TRIM4Q9C037 RNU7-187P-201ENST00000458985 68 ntBASIC-0.46□□□□□ -2.48
TRIM4Q9C037 RNU6-329P-201ENST00000459618 107 ntBASIC-0.46□□□□□ -2.48
TRIM4Q9C037 AC134698.4-201ENST00000523451 826 ntBASIC-0.46□□□□□ -2.48
TRIM4Q9C037 MIR4264-201ENST00000583520 66 ntBASIC-0.46□□□□□ -2.48
TRIM4Q9C037 AL354950.2-201ENST00000617939 290 ntBASIC-0.46□□□□□ -2.48
TRIM4Q9C037 AC072046.2-201ENST00000618366 268 ntBASIC-0.46□□□□□ -2.48
TRIM4Q9C037 MIR4320-201ENST00000636981 65 ntBASIC-0.46□□□□□ -2.48
TRIM4Q9C037 RNU4-32P-201ENST00000363404 141 ntBASIC-0.47□□□□□ -2.48
TRIM4Q9C037 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.47□□□□□ -2.48
TRIM4Q9C037 SNORD50B-201ENST00000364995 70 ntBASIC-0.47□□□□□ -2.48
TRIM4Q9C037 RNU6-364P-201ENST00000384387 107 ntBASIC-0.47□□□□□ -2.48
TRIM4Q9C037 RNU6-790P-201ENST00000384479 105 ntBASIC-0.47□□□□□ -2.48
TRIM4Q9C037 ELOCP21-201ENST00000412558 336 ntBASIC-0.47□□□□□ -2.48
TRIM4Q9C037 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.47□□□□□ -2.48
TRIM4Q9C037 AC005042.3-201ENST00000453230 174 ntBASIC-0.47□□□□□ -2.48
TRIM4Q9C037 AC010486.3-201ENST00000511602 785 ntBASIC-0.47□□□□□ -2.48
TRIM4Q9C037 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.47□□□□□ -2.48
TRIM4Q9C037 uc_338.36-201ENST00000622331 158 ntBASIC-0.47□□□□□ -2.48
TRIM4Q9C037 AC005609.4-201ENST00000625071 447 ntBASIC-0.47□□□□□ -2.48
TRIM4Q9C037 SNORA18.1-201ENST00000363418 128 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 RNU6-281P-201ENST00000384212 103 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 SNORA51.10-201ENST00000384418 136 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 MIR196A2-201ENST00000385189 110 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 RNU6-269P-201ENST00000391077 97 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 RNU6-447P-201ENST00000410293 104 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 RNU6-355P-201ENST00000410427 104 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 RNU6-791P-201ENST00000410467 104 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 RNU6-705P-201ENST00000410601 104 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 RNU6-860P-201ENST00000410860 104 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 RNU6-785P-201ENST00000411324 104 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 CYCSP46-201ENST00000423569 204 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 SNORD126-201ENST00000459475 77 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 AC116353.2-201ENST00000505332 712 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 U6.90-201ENST00000614007 104 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 U6.70-201ENST00000620287 104 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 MTND1P7-201ENST00000632801 297 ntBASIC-0.48□□□□□ -2.49
TRIM4Q9C037 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.49□□□□□ -2.49
TRIM4Q9C037 RNU6-925P-201ENST00000384629 104 ntBASIC-0.49□□□□□ -2.49
TRIM4Q9C037 MIR587-201ENST00000384845 96 ntBASIC-0.49□□□□□ -2.49
TRIM4Q9C037 SNORD75.1-201ENST00000408373 60 ntBASIC-0.49□□□□□ -2.49
TRIM4Q9C037 AL358934.1-201ENST00000432346 324 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms