Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC004817.2-201ENST00000561794 651 ntBASIC0.74□□□□□ -2.29
RPAP1Q9BWH6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.74□□□□□ -2.29
RPAP1Q9BWH6 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.74□□□□□ -2.29
RPAP1Q9BWH6 AL008636.1-201ENST00000625038 1018 ntBASIC0.74□□□□□ -2.29
RPAP1Q9BWH6 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
RPAP1Q9BWH6 CASC19-280ENST00000642102 1351 ntBASIC0.74□□□□□ -2.29
RPAP1Q9BWH6 Y_RNA.68-201ENST00000362881 102 ntBASIC0.73□□□□□ -2.29
RPAP1Q9BWH6 RNU6-99P-201ENST00000364721 107 ntBASIC0.73□□□□□ -2.29
RPAP1Q9BWH6 Y_RNA.361-201ENST00000365515 120 ntBASIC0.73□□□□□ -2.29
RPAP1Q9BWH6 RNU4-14P-201ENST00000410858 122 ntBASIC0.73□□□□□ -2.29
RPAP1Q9BWH6 Y_RNA.621-201ENST00000411065 96 ntBASIC0.73□□□□□ -2.29
RPAP1Q9BWH6 RPEP5-201ENST00000441137 268 ntBASIC0.73□□□□□ -2.29
RPAP1Q9BWH6 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.73□□□□□ -2.29
RPAP1Q9BWH6 PSMC1P5-201ENST00000512850 177 ntBASIC0.73□□□□□ -2.29
RPAP1Q9BWH6 RNU6-1337P-201ENST00000516525 95 ntBASIC0.73□□□□□ -2.29
RPAP1Q9BWH6 RNA5SP121-201ENST00000516537 101 ntBASIC0.73□□□□□ -2.29
RPAP1Q9BWH6 RNU6-358P-201ENST00000516564 75 ntBASIC0.73□□□□□ -2.29
RPAP1Q9BWH6 RNU6-307P-201ENST00000516743 106 ntBASIC0.73□□□□□ -2.29
RPAP1Q9BWH6 RNU2-12P-201ENST00000517216 168 ntBASIC0.73□□□□□ -2.29
RPAP1Q9BWH6 AC106800.4-201ENST00000614905 153 ntBASIC0.73□□□□□ -2.29
RPAP1Q9BWH6 AC243829.3-201ENST00000622177 108 ntBASIC0.73□□□□□ -2.29
RPAP1Q9BWH6 SNORD115-30-201ENST00000364117 82 ntBASIC0.72□□□□□ -2.29
RPAP1Q9BWH6 MIR1298-201ENST00000408783 112 ntBASIC0.72□□□□□ -2.29
RPAP1Q9BWH6 RNU2-64P-201ENST00000411315 191 ntBASIC0.72□□□□□ -2.29
RPAP1Q9BWH6 RPS3AP1-201ENST00000413190 320 ntBASIC0.72□□□□□ -2.29
RPAP1Q9BWH6 AL358176.2-201ENST00000425769 204 ntBASIC0.72□□□□□ -2.29
RPAP1Q9BWH6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.72□□□□□ -2.29
RPAP1Q9BWH6 RNU6-120P-201ENST00000516077 103 ntBASIC0.72□□□□□ -2.29
RPAP1Q9BWH6 RNA5SP255-201ENST00000516370 107 ntBASIC0.72□□□□□ -2.29
RPAP1Q9BWH6 AC136628.3-201ENST00000521868 290 ntBASIC0.72□□□□□ -2.29
RPAP1Q9BWH6 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.72□□□□□ -2.29
RPAP1Q9BWH6 AL591926.4-201ENST00000616895 298 ntBASIC0.72□□□□□ -2.29
RPAP1Q9BWH6 RNU6-961P-201ENST00000363893 105 ntBASIC0.71□□□□□ -2.3
RPAP1Q9BWH6 RNU6-716P-201ENST00000365621 103 ntBASIC0.71□□□□□ -2.3
RPAP1Q9BWH6 MIR452-201ENST00000385020 85 ntBASIC0.71□□□□□ -2.3
RPAP1Q9BWH6 FCF1P9-201ENST00000412546 282 ntBASIC0.71□□□□□ -2.3
RPAP1Q9BWH6 AC006461.1-201ENST00000412637 326 ntBASIC0.71□□□□□ -2.3
RPAP1Q9BWH6 MTND1P34-201ENST00000438556 671 ntBASIC0.71□□□□□ -2.3
RPAP1Q9BWH6 RPS20P10-201ENST00000451209 253 ntBASIC0.71□□□□□ -2.3
RPAP1Q9BWH6 FGF7P6-202ENST00000451282 293 ntBASIC0.71□□□□□ -2.3
RPAP1Q9BWH6 SNORA70.12-201ENST00000516084 153 ntBASIC0.71□□□□□ -2.3
RPAP1Q9BWH6 RNU6-1213P-201ENST00000517075 94 ntBASIC0.71□□□□□ -2.3
RPAP1Q9BWH6 AC023442.1-201ENST00000531247 422 ntBASIC0.71□□□□□ -2.3
RPAP1Q9BWH6 AC060780.3-201ENST00000589464 80 ntBASIC0.71□□□□□ -2.3
RPAP1Q9BWH6 AC139792.2-201ENST00000624218 587 ntBASIC0.71□□□□□ -2.3
RPAP1Q9BWH6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
RPAP1Q9BWH6 RNA5SP264-201ENST00000363115 107 ntBASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 MTND4P28-201ENST00000426217 387 ntBASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 AC093019.1-201ENST00000443135 252 ntBASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 RNU7-30P-201ENST00000516835 62 ntBASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 AC055872.1-201ENST00000570978 278 ntBASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 MIR4762-201ENST00000585261 75 ntBASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 AC006380.1-201ENST00000603598 186 ntBASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 U8.5-201ENST00000364528 136 ntBASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 MIR100-201ENST00000385259 80 ntBASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 SNORA69.1-201ENST00000390904 137 ntBASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 RNU6-192P-201ENST00000391253 100 ntBASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 Y_RNA.599-201ENST00000410489 109 ntBASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 PDCL2P1-201ENST00000419302 352 ntBASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 MTND4LP26-201ENST00000518144 282 ntBASIC0.7□□□□□ -2.3
RPAP1Q9BWH6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
RPAP1Q9BWH6 Y_RNA.72-201ENST00000362894 103 ntBASIC0.69□□□□□ -2.3
RPAP1Q9BWH6 Y_RNA.279-201ENST00000364763 95 ntBASIC0.69□□□□□ -2.3
RPAP1Q9BWH6 Y_RNA.330-201ENST00000365230 109 ntBASIC0.69□□□□□ -2.3
RPAP1Q9BWH6 RNU6-733P-201ENST00000410759 104 ntBASIC0.69□□□□□ -2.3
RPAP1Q9BWH6 FABP5P4-201ENST00000437203 171 ntBASIC0.69□□□□□ -2.3
RPAP1Q9BWH6 MTND4P17-201ENST00000470444 350 ntBASIC0.69□□□□□ -2.3
RPAP1Q9BWH6 AP003716.2-201ENST00000528260 108 ntBASIC0.69□□□□□ -2.3
RPAP1Q9BWH6 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.69□□□□□ -2.3
RPAP1Q9BWH6 AC087588.2-201ENST00000617667 426 ntBASIC0.69□□□□□ -2.3
RPAP1Q9BWH6 RNU6-845P-201ENST00000362578 103 ntBASIC0.68□□□□□ -2.3
RPAP1Q9BWH6 Y_RNA.101-201ENST00000363154 102 ntBASIC0.68□□□□□ -2.3
RPAP1Q9BWH6 RNU6-926P-201ENST00000384075 107 ntBASIC0.68□□□□□ -2.3
RPAP1Q9BWH6 Y_RNA.577-201ENST00000384794 101 ntBASIC0.68□□□□□ -2.3
RPAP1Q9BWH6 MIR605-201ENST00000385078 83 ntBASIC0.68□□□□□ -2.3
RPAP1Q9BWH6 MIR516B2-201ENST00000385190 85 ntBASIC0.68□□□□□ -2.3
RPAP1Q9BWH6 MIR136-201ENST00000385207 82 ntBASIC0.68□□□□□ -2.3
RPAP1Q9BWH6 AL031003.1-201ENST00000404229 172 ntBASIC0.68□□□□□ -2.3
RPAP1Q9BWH6 RNU6-1156P-201ENST00000410365 100 ntBASIC0.68□□□□□ -2.3
RPAP1Q9BWH6 RNU6-1304P-201ENST00000411374 106 ntBASIC0.68□□□□□ -2.3
RPAP1Q9BWH6 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.68□□□□□ -2.3
RPAP1Q9BWH6 SNORA25.10-201ENST00000515926 124 ntBASIC0.68□□□□□ -2.3
RPAP1Q9BWH6 SNORA74.3-201ENST00000517108 154 ntBASIC0.68□□□□□ -2.3
RPAP1Q9BWH6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.67□□□□□ -2.3
RPAP1Q9BWH6 AC117470.1-201ENST00000381974 330 ntBASIC0.67□□□□□ -2.3
RPAP1Q9BWH6 RNU6-767P-201ENST00000384132 107 ntBASIC0.67□□□□□ -2.3
RPAP1Q9BWH6 MIR520C-201ENST00000385005 87 ntBASIC0.67□□□□□ -2.3
RPAP1Q9BWH6 MIR92A1-201ENST00000385233 78 ntBASIC0.67□□□□□ -2.3
RPAP1Q9BWH6 MT-TL1-201ENST00000386347 75 ntBASIC0.67□□□□□ -2.3
RPAP1Q9BWH6 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
RPAP1Q9BWH6 Y_RNA.592-201ENST00000410274 109 ntBASIC0.67□□□□□ -2.3
RPAP1Q9BWH6 RNA5SP127-201ENST00000411051 133 ntBASIC0.67□□□□□ -2.3
RPAP1Q9BWH6 MLLT10P1-201ENST00000418346 262 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms