Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 MIR516B2-201ENST00000385190 85 ntBASIC0.91□□□□□ -2.26
NDUFAF3Q9BU61 RNU6-855P-201ENST00000410395 104 ntBASIC0.91□□□□□ -2.26
NDUFAF3Q9BU61 AL591704.2-201ENST00000421658 181 ntBASIC0.91□□□□□ -2.26
NDUFAF3Q9BU61 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.91□□□□□ -2.26
NDUFAF3Q9BU61 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.91□□□□□ -2.26
NDUFAF3Q9BU61 RNU7-152P-201ENST00000458982 64 ntBASIC0.91□□□□□ -2.26
NDUFAF3Q9BU61 U8.19-201ENST00000459095 133 ntBASIC0.91□□□□□ -2.26
NDUFAF3Q9BU61 SNORD19B-201ENST00000459623 84 ntBASIC0.91□□□□□ -2.26
NDUFAF3Q9BU61 HMGN1P7-201ENST00000491722 313 ntBASIC0.91□□□□□ -2.26
NDUFAF3Q9BU61 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.91□□□□□ -2.26
NDUFAF3Q9BU61 UBL5P1-201ENST00000507979 193 ntBASIC0.91□□□□□ -2.26
NDUFAF3Q9BU61 FGF7P4-201ENST00000509595 295 ntBASIC0.91□□□□□ -2.26
NDUFAF3Q9BU61 RNU6-875P-201ENST00000516488 106 ntBASIC0.91□□□□□ -2.26
NDUFAF3Q9BU61 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.91□□□□□ -2.26
NDUFAF3Q9BU61 AC092447.9-201ENST00000603395 144 ntBASIC0.91□□□□□ -2.26
NDUFAF3Q9BU61 PRELID3BP2-201ENST00000605362 201 ntBASIC0.91□□□□□ -2.26
NDUFAF3Q9BU61 AC008163.1-202ENST00000636004 2889 ntBASIC0.91□□□□□ -2.26
NDUFAF3Q9BU61 Y_RNA.39-201ENST00000362620 98 ntBASIC0.9□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.356-201ENST00000365475 113 ntBASIC0.9□□□□□ -2.27
NDUFAF3Q9BU61 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.9□□□□□ -2.27
NDUFAF3Q9BU61 AC245047.8-201ENST00000456455 284 ntBASIC0.9□□□□□ -2.27
NDUFAF3Q9BU61 SNORD124-201ENST00000459577 104 ntBASIC0.9□□□□□ -2.27
NDUFAF3Q9BU61 AC004223.1-201ENST00000479840 271 ntBASIC0.9□□□□□ -2.27
NDUFAF3Q9BU61 RPS26P48-201ENST00000491713 339 ntBASIC0.9□□□□□ -2.27
NDUFAF3Q9BU61 SNORD45.4-201ENST00000516629 73 ntBASIC0.9□□□□□ -2.27
NDUFAF3Q9BU61 MIR3192-201ENST00000584920 77 ntBASIC0.9□□□□□ -2.27
NDUFAF3Q9BU61 MIR4295-201ENST00000585286 85 ntBASIC0.9□□□□□ -2.27
NDUFAF3Q9BU61 RPS29P30-201ENST00000600975 111 ntBASIC0.9□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.772-201ENST00000606692 102 ntBASIC0.9□□□□□ -2.27
NDUFAF3Q9BU61 AC010205.1-201ENST00000616668 449 ntBASIC0.9□□□□□ -2.27
NDUFAF3Q9BU61 AL391516.1-201ENST00000554380 2449 ntBASIC0.9□□□□□ -2.27
NDUFAF3Q9BU61 RNU6-1115P-201ENST00000362490 106 ntBASIC0.89□□□□□ -2.27
NDUFAF3Q9BU61 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.529-201ENST00000384586 119 ntBASIC0.89□□□□□ -2.27
NDUFAF3Q9BU61 MIR136-201ENST00000385207 82 ntBASIC0.89□□□□□ -2.27
NDUFAF3Q9BU61 RNU6-1009P-201ENST00000390996 107 ntBASIC0.89□□□□□ -2.27
NDUFAF3Q9BU61 RNU6-131P-201ENST00000391144 107 ntBASIC0.89□□□□□ -2.27
NDUFAF3Q9BU61 AL390729.2-201ENST00000416137 156 ntBASIC0.89□□□□□ -2.27
NDUFAF3Q9BU61 AC236972.2-201ENST00000434979 310 ntBASIC0.89□□□□□ -2.27
NDUFAF3Q9BU61 AC136932.1-201ENST00000574771 208 ntBASIC0.89□□□□□ -2.27
NDUFAF3Q9BU61 MIR4661-201ENST00000582720 75 ntBASIC0.89□□□□□ -2.27
NDUFAF3Q9BU61 MIR5188-201ENST00000583467 113 ntBASIC0.89□□□□□ -2.27
NDUFAF3Q9BU61 RBM11P1-201ENST00000604951 799 ntBASIC0.89□□□□□ -2.27
NDUFAF3Q9BU61 AL391903.3-201ENST00000612158 163 ntBASIC0.89□□□□□ -2.27
NDUFAF3Q9BU61 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.89□□□□□ -2.27
NDUFAF3Q9BU61 AL138825.1-201ENST00000618587 192 ntBASIC0.89□□□□□ -2.27
NDUFAF3Q9BU61 AC104985.2-201ENST00000620598 500 ntBASIC0.89□□□□□ -2.27
NDUFAF3Q9BU61 AC091925.1-201ENST00000623204 462 ntBASIC0.89□□□□□ -2.27
NDUFAF3Q9BU61 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
NDUFAF3Q9BU61 snoU2-30.1-201ENST00000365012 70 ntBASIC0.88□□□□□ -2.27
NDUFAF3Q9BU61 SNORD114-24-201ENST00000365029 72 ntBASIC0.88□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.331-201ENST00000365267 102 ntBASIC0.88□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.341-201ENST00000365341 102 ntBASIC0.88□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.462-201ENST00000384268 102 ntBASIC0.88□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.496-201ENST00000384444 101 ntBASIC0.88□□□□□ -2.27
NDUFAF3Q9BU61 AL160004.2-201ENST00000432935 350 ntBASIC0.88□□□□□ -2.27
NDUFAF3Q9BU61 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.88□□□□□ -2.27
NDUFAF3Q9BU61 RPS29P29-201ENST00000456396 171 ntBASIC0.88□□□□□ -2.27
NDUFAF3Q9BU61 snoU13.25-201ENST00000458945 104 ntBASIC0.88□□□□□ -2.27
NDUFAF3Q9BU61 RNU7-21P-201ENST00000459430 62 ntBASIC0.88□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.714-201ENST00000517065 90 ntBASIC0.88□□□□□ -2.27
NDUFAF3Q9BU61 SNORA74.3-201ENST00000517108 154 ntBASIC0.88□□□□□ -2.27
NDUFAF3Q9BU61 MIR4423-201ENST00000580922 80 ntBASIC0.88□□□□□ -2.27
NDUFAF3Q9BU61 AC011373.1-201ENST00000607270 237 ntBASIC0.88□□□□□ -2.27
NDUFAF3Q9BU61 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.88□□□□□ -2.27
NDUFAF3Q9BU61 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.88□□□□□ -2.27
NDUFAF3Q9BU61 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.263-201ENST00000364659 114 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 AC117470.1-201ENST00000381974 330 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 RNU6-969P-201ENST00000383900 105 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 RNU6-1323P-201ENST00000384025 107 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.458-201ENST00000384240 102 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 MIR200A-201ENST00000384875 90 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 MIR520C-201ENST00000385005 87 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 SNORA75.2-201ENST00000391138 150 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 SNORA75.3-201ENST00000391231 150 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 AC024067.1-201ENST00000426199 223 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 SNRPGP10-201ENST00000432323 225 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 RNU7-90P-201ENST00000459216 62 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 RNU4-77P-201ENST00000516692 156 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 RNU7-110P-201ENST00000516891 62 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 RNU7-116P-201ENST00000516940 62 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 AC090142.3-201ENST00000519012 385 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 POLR3GP1-201ENST00000594073 261 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 DEFB117-201ENST00000602356 141 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 AL121655.1-201ENST00000605811 308 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 AL606534.2-204ENST00000635008 178 ntBASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.224-201ENST00000364308 111 ntBASIC0.86□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.252-201ENST00000364556 101 ntBASIC0.86□□□□□ -2.27
NDUFAF3Q9BU61 SNORD50B-201ENST00000364995 70 ntBASIC0.86□□□□□ -2.27
NDUFAF3Q9BU61 RNU1-115P-201ENST00000365329 160 ntBASIC0.86□□□□□ -2.27
NDUFAF3Q9BU61 SNORD14.1-201ENST00000365609 90 ntBASIC0.86□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.456-201ENST00000384232 111 ntBASIC0.86□□□□□ -2.27
NDUFAF3Q9BU61 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.86□□□□□ -2.27
NDUFAF3Q9BU61 RNU6-507P-201ENST00000516045 100 ntBASIC0.86□□□□□ -2.27
NDUFAF3Q9BU61 Y_RNA.673-201ENST00000516306 88 ntBASIC0.86□□□□□ -2.27
NDUFAF3Q9BU61 SNORA18.7-201ENST00000516910 131 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms