Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 AL513423.1-201ENST00000621695 132 ntBASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.03□□□□□ -2.24
CCDC71LQ8N9Z2 ZNF209P-201ENST00000593450 2304 ntBASIC1.03□□□□□ -2.25
CCDC71LQ8N9Z2 SNORD68-201ENST00000363214 84 ntBASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 RNU4-76P-201ENST00000364509 141 ntBASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 Y_RNA.286-201ENST00000364813 102 ntBASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 SNORD63-201ENST00000384262 68 ntBASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 MIR660-201ENST00000385235 97 ntBASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 AL590004.1-201ENST00000405321 300 ntBASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 RNU6-710P-201ENST00000410424 105 ntBASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 RPS20P10-201ENST00000451209 253 ntBASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 AC108729.3-201ENST00000513484 108 ntBASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 Y_RNA.715-201ENST00000517082 110 ntBASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 RNU6-1116P-201ENST00000517269 99 ntBASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 AC022616.4-201ENST00000522985 181 ntBASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 AC011604.1-201ENST00000545978 196 ntBASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 AC136932.1-201ENST00000574771 208 ntBASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 MIR3171-201ENST00000584270 74 ntBASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 AL645939.4-201ENST00000604495 135 ntBASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 AC005972.2-201ENST00000604690 348 ntBASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 MIR8065-201ENST00000620577 100 ntBASIC1.02□□□□□ -2.25
CCDC71LQ8N9Z2 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
CCDC71LQ8N9Z2 RNU6-457P-201ENST00000363999 107 ntBASIC1.01□□□□□ -2.25
CCDC71LQ8N9Z2 SNORA70.7-201ENST00000384159 133 ntBASIC1.01□□□□□ -2.25
CCDC71LQ8N9Z2 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.01□□□□□ -2.25
CCDC71LQ8N9Z2 Y_RNA.602-201ENST00000410535 92 ntBASIC1.01□□□□□ -2.25
CCDC71LQ8N9Z2 AC024067.1-201ENST00000426199 223 ntBASIC1.01□□□□□ -2.25
CCDC71LQ8N9Z2 SNORD13-201ENST00000459299 104 ntBASIC1.01□□□□□ -2.25
CCDC71LQ8N9Z2 RNU6-1153P-201ENST00000516760 105 ntBASIC1.01□□□□□ -2.25
CCDC71LQ8N9Z2 Y_RNA.701-201ENST00000516812 110 ntBASIC1.01□□□□□ -2.25
CCDC71LQ8N9Z2 Y_RNA.711-201ENST00000516993 102 ntBASIC1.01□□□□□ -2.25
CCDC71LQ8N9Z2 AL358944.1-201ENST00000528537 144 ntBASIC1.01□□□□□ -2.25
CCDC71LQ8N9Z2 AL161670.1-201ENST00000554348 137 ntBASIC1.01□□□□□ -2.25
CCDC71LQ8N9Z2 RAC1P9-201ENST00000604990 392 ntBASIC1.01□□□□□ -2.25
CCDC71LQ8N9Z2 SNORD113-5-201ENST00000607261 78 ntBASIC1.01□□□□□ -2.25
CCDC71LQ8N9Z2 MIR376A1-201ENST00000616574 68 ntBASIC1.01□□□□□ -2.25
CCDC71LQ8N9Z2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.01□□□□□ -2.25
CCDC71LQ8N9Z2 Y_RNA.140-201ENST00000363474 103 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 SNORD113-8-201ENST00000363497 74 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 Y_RNA.338-201ENST00000365320 114 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 SNORA63.7-201ENST00000365579 123 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 Y_RNA.383-201ENST00000383855 97 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 RNU6-163P-201ENST00000384396 106 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 Y_RNA.527-201ENST00000384573 102 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 SNORA40.6-201ENST00000391153 128 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 MIR1252-201ENST00000408861 65 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 MLLT10P1-201ENST00000418346 262 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 AL591704.2-201ENST00000421658 181 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 POLR2KP2-201ENST00000438155 177 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 SEPT14P8-201ENST00000508026 178 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 RNU6-947P-201ENST00000516264 106 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 RNU6-897P-201ENST00000517135 105 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 Y_RNA.721-201ENST00000517207 102 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 AC020661.2-201ENST00000560114 134 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 MIR4498-201ENST00000577599 66 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 snoU13.31-201ENST00000607291 104 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 AL591926.4-201ENST00000616895 298 ntBASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
CCDC71LQ8N9Z2 MIR378A-201ENST00000362177 66 ntBASIC0.99□□□□□ -2.25
CCDC71LQ8N9Z2 RNU6-199P-201ENST00000362954 107 ntBASIC0.99□□□□□ -2.25
CCDC71LQ8N9Z2 Y_RNA.310-201ENST00000365063 113 ntBASIC0.99□□□□□ -2.25
CCDC71LQ8N9Z2 RNU6-1105P-201ENST00000384774 107 ntBASIC0.99□□□□□ -2.25
CCDC71LQ8N9Z2 PIGPP3-201ENST00000425307 415 ntBASIC0.99□□□□□ -2.25
CCDC71LQ8N9Z2 AC004223.1-201ENST00000479840 271 ntBASIC0.99□□□□□ -2.25
CCDC71LQ8N9Z2 MIR4300-201ENST00000581016 96 ntBASIC0.99□□□□□ -2.25
CCDC71LQ8N9Z2 AL356055.1-201ENST00000602528 446 ntBASIC0.99□□□□□ -2.25
CCDC71LQ8N9Z2 AL512598.1-201ENST00000610158 273 ntBASIC0.99□□□□□ -2.25
CCDC71LQ8N9Z2 MIRLET7C-201ENST00000362160 84 ntBASIC0.98□□□□□ -2.25
CCDC71LQ8N9Z2 MIR337-201ENST00000362281 93 ntBASIC0.98□□□□□ -2.25
CCDC71LQ8N9Z2 RNU4-80P-201ENST00000363200 141 ntBASIC0.98□□□□□ -2.25
CCDC71LQ8N9Z2 Y_RNA.158-201ENST00000363651 101 ntBASIC0.98□□□□□ -2.25
CCDC71LQ8N9Z2 Y_RNA.183-201ENST00000363882 113 ntBASIC0.98□□□□□ -2.25
CCDC71LQ8N9Z2 Y_RNA.368-201ENST00000365547 113 ntBASIC0.98□□□□□ -2.25
CCDC71LQ8N9Z2 RNU6-102P-201ENST00000384485 104 ntBASIC0.98□□□□□ -2.25
CCDC71LQ8N9Z2 AC108667.1-201ENST00000428618 249 ntBASIC0.98□□□□□ -2.25
CCDC71LQ8N9Z2 RPS29P28-201ENST00000446439 141 ntBASIC0.98□□□□□ -2.25
CCDC71LQ8N9Z2 RPL39P38-201ENST00000467018 153 ntBASIC0.98□□□□□ -2.25
CCDC71LQ8N9Z2 HMGN1P10-201ENST00000474557 553 ntBASIC0.98□□□□□ -2.25
CCDC71LQ8N9Z2 AC117454.1-201ENST00000491120 168 ntBASIC0.98□□□□□ -2.25
CCDC71LQ8N9Z2 RNY3P15-201ENST00000516297 97 ntBASIC0.98□□□□□ -2.25
CCDC71LQ8N9Z2 Y_RNA.676-201ENST00000516393 96 ntBASIC0.98□□□□□ -2.25
CCDC71LQ8N9Z2 SNORA40.15-201ENST00000516884 107 ntBASIC0.98□□□□□ -2.25
CCDC71LQ8N9Z2 RNU6-165P-201ENST00000517170 99 ntBASIC0.98□□□□□ -2.25
CCDC71LQ8N9Z2 MIR3660-201ENST00000584845 100 ntBASIC0.98□□□□□ -2.25
CCDC71LQ8N9Z2 POLR3GP1-201ENST00000594073 261 ntBASIC0.98□□□□□ -2.25
CCDC71LQ8N9Z2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
CCDC71LQ8N9Z2 Y_RNA.105-201ENST00000363182 111 ntBASIC0.97□□□□□ -2.25
CCDC71LQ8N9Z2 Y_RNA.202-201ENST00000364083 110 ntBASIC0.97□□□□□ -2.25
CCDC71LQ8N9Z2 Y_RNA.455-201ENST00000384230 98 ntBASIC0.97□□□□□ -2.25
CCDC71LQ8N9Z2 Y_RNA.456-201ENST00000384232 111 ntBASIC0.97□□□□□ -2.25
CCDC71LQ8N9Z2 SNORA72-201ENST00000384339 132 ntBASIC0.97□□□□□ -2.25
CCDC71LQ8N9Z2 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
CCDC71LQ8N9Z2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.97□□□□□ -2.25
CCDC71LQ8N9Z2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.97□□□□□ -2.25
CCDC71LQ8N9Z2 AC104332.1-201ENST00000440471 797 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms