Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 BNIP3P39-201ENST00000601077 554 ntBASIC-2.01□□□□□ -2.73
LINC00643Q86TS7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-2.02□□□□□ -2.73
LINC00643Q86TS7 SNORD14E-201ENST00000364009 85 ntBASIC-2.02□□□□□ -2.73
LINC00643Q86TS7 Y_RNA.576-201ENST00000384781 102 ntBASIC-2.02□□□□□ -2.73
LINC00643Q86TS7 MIR518B-201ENST00000385127 83 ntBASIC-2.02□□□□□ -2.73
LINC00643Q86TS7 RNA5SP25-201ENST00000410815 110 ntBASIC-2.02□□□□□ -2.73
LINC00643Q86TS7 RPL39P25-201ENST00000449384 154 ntBASIC-2.02□□□□□ -2.73
LINC00643Q86TS7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-2.02□□□□□ -2.73
LINC00643Q86TS7 U8.21-201ENST00000459536 136 ntBASIC-2.02□□□□□ -2.73
LINC00643Q86TS7 AC091144.1-201ENST00000519573 138 ntBASIC-2.02□□□□□ -2.73
LINC00643Q86TS7 MIR3118-1-201ENST00000581787 76 ntBASIC-2.02□□□□□ -2.73
LINC00643Q86TS7 RNU6-88P-201ENST00000606801 100 ntBASIC-2.02□□□□□ -2.73
LINC00643Q86TS7 AP002371.2-201ENST00000624450 503 ntBASIC-2.02□□□□□ -2.73
LINC00643Q86TS7 Y_RNA.269-201ENST00000364685 89 ntBASIC-2.03□□□□□ -2.73
LINC00643Q86TS7 RNU6-354P-201ENST00000383862 107 ntBASIC-2.03□□□□□ -2.73
LINC00643Q86TS7 RNU6-10P-201ENST00000384036 107 ntBASIC-2.03□□□□□ -2.73
LINC00643Q86TS7 RNU6-610P-201ENST00000384264 107 ntBASIC-2.03□□□□□ -2.73
LINC00643Q86TS7 RNU6-900P-201ENST00000384498 102 ntBASIC-2.03□□□□□ -2.73
LINC00643Q86TS7 MIR558-201ENST00000384920 94 ntBASIC-2.03□□□□□ -2.73
LINC00643Q86TS7 MTCYBP4-201ENST00000401524 249 ntBASIC-2.03□□□□□ -2.73
LINC00643Q86TS7 AL354751.2-201ENST00000415471 210 ntBASIC-2.03□□□□□ -2.73
LINC00643Q86TS7 AC073464.1-201ENST00000429823 534 ntBASIC-2.03□□□□□ -2.73
LINC00643Q86TS7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-2.03□□□□□ -2.73
LINC00643Q86TS7 SNORA25.17-201ENST00000517184 124 ntBASIC-2.03□□□□□ -2.73
LINC00643Q86TS7 RNU6-179P-201ENST00000363350 107 ntBASIC-2.04□□□□□ -2.74
LINC00643Q86TS7 Y_RNA.588-201ENST00000391254 102 ntBASIC-2.04□□□□□ -2.74
LINC00643Q86TS7 MIR450B-201ENST00000401182 78 ntBASIC-2.04□□□□□ -2.74
LINC00643Q86TS7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-2.04□□□□□ -2.74
LINC00643Q86TS7 UQCRBP2-201ENST00000447827 297 ntBASIC-2.04□□□□□ -2.74
LINC00643Q86TS7 RPL39P5-202ENST00000512505 151 ntBASIC-2.04□□□□□ -2.74
LINC00643Q86TS7 AC131281.1-201ENST00000522984 164 ntBASIC-2.04□□□□□ -2.74
LINC00643Q86TS7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-2.04□□□□□ -2.74
LINC00643Q86TS7 RNA5SP245-201ENST00000364239 121 ntBASIC-2.05□□□□□ -2.74
LINC00643Q86TS7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-2.05□□□□□ -2.74
LINC00643Q86TS7 SNORD41.1-201ENST00000391000 69 ntBASIC-2.05□□□□□ -2.74
LINC00643Q86TS7 MTCO2P3-201ENST00000442543 421 ntBASIC-2.05□□□□□ -2.74
LINC00643Q86TS7 AC091179.3-201ENST00000474761 144 ntBASIC-2.05□□□□□ -2.74
LINC00643Q86TS7 AC022137.1-201ENST00000483735 151 ntBASIC-2.05□□□□□ -2.74
LINC00643Q86TS7 AC073648.5-201ENST00000603502 305 ntBASIC-2.05□□□□□ -2.74
LINC00643Q86TS7 MTRNR2L2-201ENST00000604882 87 ntBASIC-2.05□□□□□ -2.74
LINC00643Q86TS7 Z97988.1-201ENST00000637697 135 ntBASIC-2.05□□□□□ -2.74
LINC00643Q86TS7 RNA5SP192-201ENST00000364404 120 ntBASIC-2.06□□□□□ -2.74
LINC00643Q86TS7 RNU6-784P-201ENST00000384330 106 ntBASIC-2.06□□□□□ -2.74
LINC00643Q86TS7 SNORA72.6-201ENST00000384520 129 ntBASIC-2.06□□□□□ -2.74
LINC00643Q86TS7 MTCYBP36-201ENST00000404146 440 ntBASIC-2.06□□□□□ -2.74
LINC00643Q86TS7 AC137499.1-201ENST00000427602 88 ntBASIC-2.06□□□□□ -2.74
LINC00643Q86TS7 RNA5SP484-201ENST00000458857 111 ntBASIC-2.06□□□□□ -2.74
LINC00643Q86TS7 RNU7-104P-201ENST00000459398 79 ntBASIC-2.06□□□□□ -2.74
LINC00643Q86TS7 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-2.06□□□□□ -2.74
LINC00643Q86TS7 Y_RNA.714-201ENST00000517065 90 ntBASIC-2.06□□□□□ -2.74
LINC00643Q86TS7 AC002044.1-201ENST00000606707 158 ntBASIC-2.06□□□□□ -2.74
LINC00643Q86TS7 AC011373.1-201ENST00000607270 237 ntBASIC-2.06□□□□□ -2.74
LINC00643Q86TS7 AC022418.1-201ENST00000624118 445 ntBASIC-2.06□□□□□ -2.74
LINC00643Q86TS7 SNORD115-8-201ENST00000363856 82 ntBASIC-2.07□□□□□ -2.74
LINC00643Q86TS7 SNORD115-38-201ENST00000365037 82 ntBASIC-2.07□□□□□ -2.74
LINC00643Q86TS7 Y_RNA.508-201ENST00000384502 114 ntBASIC-2.07□□□□□ -2.74
LINC00643Q86TS7 RNA5SP118-201ENST00000410385 109 ntBASIC-2.07□□□□□ -2.74
LINC00643Q86TS7 MTATP6P18-201ENST00000417994 673 ntBASIC-2.07□□□□□ -2.74
LINC00643Q86TS7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-2.07□□□□□ -2.74
LINC00643Q86TS7 AC079140.5-201ENST00000507882 310 ntBASIC-2.07□□□□□ -2.74
LINC00643Q86TS7 MTND1P35-201ENST00000526739 508 ntBASIC-2.07□□□□□ -2.74
LINC00643Q86TS7 RNY1P9-201ENST00000532431 109 ntBASIC-2.07□□□□□ -2.74
LINC00643Q86TS7 AL049777.1-201ENST00000622740 518 ntBASIC-2.07□□□□□ -2.74
LINC00643Q86TS7 RNU6-723P-201ENST00000383973 107 ntBASIC-2.08□□□□□ -2.74
LINC00643Q86TS7 RNU6-468P-201ENST00000384003 109 ntBASIC-2.08□□□□□ -2.74
LINC00643Q86TS7 SNORA24-201ENST00000384096 131 ntBASIC-2.08□□□□□ -2.74
LINC00643Q86TS7 RNY3P5-201ENST00000384127 102 ntBASIC-2.08□□□□□ -2.74
LINC00643Q86TS7 MIR587-201ENST00000384845 96 ntBASIC-2.08□□□□□ -2.74
LINC00643Q86TS7 MIRLET7F2-201ENST00000385277 83 ntBASIC-2.08□□□□□ -2.74
LINC00643Q86TS7 RNU6-1106P-201ENST00000390845 107 ntBASIC-2.08□□□□□ -2.74
LINC00643Q86TS7 MTND3P9-201ENST00000429526 346 ntBASIC-2.08□□□□□ -2.74
LINC00643Q86TS7 USP9YP16-201ENST00000430287 407 ntBASIC-2.08□□□□□ -2.74
LINC00643Q86TS7 RNU6-107P-201ENST00000516643 102 ntBASIC-2.08□□□□□ -2.74
LINC00643Q86TS7 RNU6-1003P-201ENST00000517099 105 ntBASIC-2.08□□□□□ -2.74
LINC00643Q86TS7 RNU7-161P-201ENST00000517289 62 ntBASIC-2.08□□□□□ -2.74
LINC00643Q86TS7 AC022616.6-201ENST00000520479 119 ntBASIC-2.08□□□□□ -2.74
LINC00643Q86TS7 AL360085.1-201ENST00000604713 532 ntBASIC-2.08□□□□□ -2.74
LINC00643Q86TS7 AL391834.2-201ENST00000609982 546 ntBASIC-2.08□□□□□ -2.74
LINC00643Q86TS7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-2.08□□□□□ -2.74
LINC00643Q86TS7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-2.08□□□□□ -2.74
LINC00643Q86TS7 Y_RNA.123-201ENST00000363338 102 ntBASIC-2.09□□□□□ -2.74
LINC00643Q86TS7 RNU6-509P-201ENST00000363519 107 ntBASIC-2.09□□□□□ -2.74
LINC00643Q86TS7 Y_RNA.238-201ENST00000364441 102 ntBASIC-2.09□□□□□ -2.74
LINC00643Q86TS7 SNORD115-7-201ENST00000365306 82 ntBASIC-2.09□□□□□ -2.74
LINC00643Q86TS7 Y_RNA.450-201ENST00000384198 113 ntBASIC-2.09□□□□□ -2.74
LINC00643Q86TS7 SNORD64-201ENST00000386683 67 ntBASIC-2.09□□□□□ -2.74
LINC00643Q86TS7 RNU6-550P-201ENST00000391057 101 ntBASIC-2.09□□□□□ -2.74
LINC00643Q86TS7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-2.09□□□□□ -2.74
LINC00643Q86TS7 SNORD22.1-201ENST00000516331 125 ntBASIC-2.09□□□□□ -2.74
LINC00643Q86TS7 RNU6-706P-201ENST00000517229 104 ntBASIC-2.09□□□□□ -2.74
LINC00643Q86TS7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-2.09□□□□□ -2.74
LINC00643Q86TS7 AC090616.2-202ENST00000584248 222 ntBASIC-2.09□□□□□ -2.74
LINC00643Q86TS7 RNU6-1309P-201ENST00000363305 108 ntBASIC-2.1□□□□□ -2.75
LINC00643Q86TS7 MIR181B2-201ENST00000385004 89 ntBASIC-2.1□□□□□ -2.75
LINC00643Q86TS7 SNORD12C-201ENST00000386307 89 ntBASIC-2.1□□□□□ -2.75
LINC00643Q86TS7 RNU6-602P-201ENST00000411155 105 ntBASIC-2.1□□□□□ -2.75
LINC00643Q86TS7 MIR4491-201ENST00000581087 68 ntBASIC-2.1□□□□□ -2.75
LINC00643Q86TS7 AC131235.4-201ENST00000609288 620 ntBASIC-2.1□□□□□ -2.75
LINC00643Q86TS7 MIR8055-201ENST00000610739 97 ntBASIC-2.1□□□□□ -2.75
LINC00643Q86TS7 RNU6-266P-201ENST00000364225 107 ntBASIC-2.11□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 463.6 ms