Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 RNU6-969P-201ENST00000383900 105 ntBASIC2.4□□□□□ -2.03
SF3B3Q15393 MIR17-201ENST00000385012 84 ntBASIC2.4□□□□□ -2.03
SF3B3Q15393 Y_RNA.580-201ENST00000391004 95 ntBASIC2.4□□□□□ -2.03
SF3B3Q15393 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.4□□□□□ -2.03
SF3B3Q15393 AC005840.1-201ENST00000498412 377 ntBASIC2.4□□□□□ -2.03
SF3B3Q15393 SCARNA8-201ENST00000515924 131 ntBASIC2.4□□□□□ -2.03
SF3B3Q15393 RNU6-856P-201ENST00000516959 98 ntBASIC2.4□□□□□ -2.03
SF3B3Q15393 MIR3910-1-201ENST00000580936 111 ntBASIC2.4□□□□□ -2.03
SF3B3Q15393 MIR4744-201ENST00000581563 82 ntBASIC2.4□□□□□ -2.03
SF3B3Q15393 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.4□□□□□ -2.03
SF3B3Q15393 AC005972.2-201ENST00000604690 348 ntBASIC2.4□□□□□ -2.03
SF3B3Q15393 U4atac.1-201ENST00000618345 95 ntBASIC2.4□□□□□ -2.03
SF3B3Q15393 AC005336.3-201ENST00000623833 2679 ntBASIC2.39□□□□□ -2.03
SF3B3Q15393 ZNF720P1-201ENST00000562403 1939 ntBASIC2.39□□□□□ -2.03
SF3B3Q15393 AL157777.2-201ENST00000258070 137 ntBASIC2.39□□□□□ -2.03
SF3B3Q15393 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SF3B3Q15393 RNU4-84P-201ENST00000364200 139 ntBASIC2.39□□□□□ -2.03
SF3B3Q15393 MIR616-201ENST00000385293 97 ntBASIC2.39□□□□□ -2.03
SF3B3Q15393 RNU6-578P-201ENST00000390980 103 ntBASIC2.39□□□□□ -2.03
SF3B3Q15393 AL356379.1-201ENST00000414105 126 ntBASIC2.39□□□□□ -2.03
SF3B3Q15393 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.39□□□□□ -2.03
SF3B3Q15393 SEPT7P4-201ENST00000437076 306 ntBASIC2.39□□□□□ -2.03
SF3B3Q15393 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.39□□□□□ -2.03
SF3B3Q15393 Y_RNA.797-201ENST00000515977 94 ntBASIC2.39□□□□□ -2.03
SF3B3Q15393 RNU6-346P-201ENST00000516288 111 ntBASIC2.39□□□□□ -2.03
SF3B3Q15393 RNU6-667P-201ENST00000517186 102 ntBASIC2.39□□□□□ -2.03
SF3B3Q15393 AC127455.1-201ENST00000565496 145 ntBASIC2.39□□□□□ -2.03
SF3B3Q15393 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.39□□□□□ -2.03
SF3B3Q15393 CENPCP1-201ENST00000533085 2578 ntBASIC2.39□□□□□ -2.03
SF3B3Q15393 SNORA36B-201ENST00000410438 131 ntBASIC2.38□□□□□ -2.03
SF3B3Q15393 EBAG9P1-201ENST00000418955 543 ntBASIC2.38□□□□□ -2.03
SF3B3Q15393 AC010154.1-201ENST00000425857 269 ntBASIC2.38□□□□□ -2.03
SF3B3Q15393 AC055731.1-201ENST00000474387 401 ntBASIC2.38□□□□□ -2.03
SF3B3Q15393 AC010409.1-201ENST00000487382 476 ntBASIC2.38□□□□□ -2.03
SF3B3Q15393 RNU6-63P-201ENST00000516690 95 ntBASIC2.38□□□□□ -2.03
SF3B3Q15393 RNU6-453P-201ENST00000516819 85 ntBASIC2.38□□□□□ -2.03
SF3B3Q15393 SNORA31.25-201ENST00000517242 134 ntBASIC2.38□□□□□ -2.03
SF3B3Q15393 MIR4724-201ENST00000579485 89 ntBASIC2.38□□□□□ -2.03
SF3B3Q15393 POLR3GP1-201ENST00000594073 261 ntBASIC2.38□□□□□ -2.03
SF3B3Q15393 AP000942.3-201ENST00000603702 160 ntBASIC2.38□□□□□ -2.03
SF3B3Q15393 AL391903.3-201ENST00000612158 163 ntBASIC2.38□□□□□ -2.03
SF3B3Q15393 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.38□□□□□ -2.03
SF3B3Q15393 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SF3B3Q15393 RNU1-22P-201ENST00000363334 158 ntBASIC2.37□□□□□ -2.03
SF3B3Q15393 RNU6-1130P-201ENST00000365434 107 ntBASIC2.37□□□□□ -2.03
SF3B3Q15393 RNA5SP511-201ENST00000410487 115 ntBASIC2.37□□□□□ -2.03
SF3B3Q15393 AL162725.1-201ENST00000435405 301 ntBASIC2.37□□□□□ -2.03
SF3B3Q15393 RPS27P22-201ENST00000478056 241 ntBASIC2.37□□□□□ -2.03
SF3B3Q15393 SNORA4.4-201ENST00000515921 135 ntBASIC2.37□□□□□ -2.03
SF3B3Q15393 RNU7-116P-201ENST00000516940 62 ntBASIC2.37□□□□□ -2.03
SF3B3Q15393 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.37□□□□□ -2.03
SF3B3Q15393 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.37□□□□□ -2.03
SF3B3Q15393 AC015720.1-201ENST00000565251 277 ntBASIC2.37□□□□□ -2.03
SF3B3Q15393 AC007229.1-201ENST00000590455 412 ntBASIC2.37□□□□□ -2.03
SF3B3Q15393 U2.22-201ENST00000636441 106 ntBASIC2.37□□□□□ -2.03
SF3B3Q15393 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.36□□□□□ -2.03
SF3B3Q15393 MIR367-201ENST00000362299 68 ntBASIC2.36□□□□□ -2.03
SF3B3Q15393 Y_RNA.229-201ENST00000364347 113 ntBASIC2.36□□□□□ -2.03
SF3B3Q15393 SNORA25B-201ENST00000365507 128 ntBASIC2.36□□□□□ -2.03
SF3B3Q15393 RNU6-383P-201ENST00000410864 94 ntBASIC2.36□□□□□ -2.03
SF3B3Q15393 SRIP3-201ENST00000413200 219 ntBASIC2.36□□□□□ -2.03
SF3B3Q15393 AC060773.1-201ENST00000421698 310 ntBASIC2.36□□□□□ -2.03
SF3B3Q15393 AL445685.2-201ENST00000422551 342 ntBASIC2.36□□□□□ -2.03
SF3B3Q15393 AC003989.2-201ENST00000440224 169 ntBASIC2.36□□□□□ -2.03
SF3B3Q15393 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.36□□□□□ -2.03
SF3B3Q15393 AC245047.8-201ENST00000456455 284 ntBASIC2.36□□□□□ -2.03
SF3B3Q15393 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.36□□□□□ -2.03
SF3B3Q15393 AC097462.1-201ENST00000514125 324 ntBASIC2.36□□□□□ -2.03
SF3B3Q15393 AC109810.1-201ENST00000534066 224 ntBASIC2.36□□□□□ -2.03
SF3B3Q15393 MIR4431-201ENST00000579990 94 ntBASIC2.36□□□□□ -2.03
SF3B3Q15393 MIR3683-201ENST00000580847 82 ntBASIC2.36□□□□□ -2.03
SF3B3Q15393 MIR4438-201ENST00000585271 93 ntBASIC2.36□□□□□ -2.03
SF3B3Q15393 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SF3B3Q15393 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
SF3B3Q15393 RNA5SP160-201ENST00000364866 120 ntBASIC2.35□□□□□ -2.03
SF3B3Q15393 SNORD50.2-201ENST00000365465 70 ntBASIC2.35□□□□□ -2.03
SF3B3Q15393 Y_RNA.357-201ENST00000365487 109 ntBASIC2.35□□□□□ -2.03
SF3B3Q15393 SNORD116-18-201ENST00000383961 92 ntBASIC2.35□□□□□ -2.03
SF3B3Q15393 MIR9-3-201ENST00000385084 90 ntBASIC2.35□□□□□ -2.03
SF3B3Q15393 MIR613-201ENST00000385248 95 ntBASIC2.35□□□□□ -2.03
SF3B3Q15393 MIR1278-201ENST00000408753 81 ntBASIC2.35□□□□□ -2.03
SF3B3Q15393 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.35□□□□□ -2.03
SF3B3Q15393 RNU2-19P-201ENST00000517288 84 ntBASIC2.35□□□□□ -2.03
SF3B3Q15393 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.35□□□□□ -2.03
SF3B3Q15393 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.35□□□□□ -2.03
SF3B3Q15393 MTND1P7-201ENST00000632801 297 ntBASIC2.35□□□□□ -2.03
SF3B3Q15393 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.35□□□□□ -2.03
SF3B3Q15393 AL359851.1-201ENST00000569460 4997 ntBASIC2.34□□□□□ -2.03
SF3B3Q15393 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.34□□□□□ -2.03
SF3B3Q15393 RNU6-449P-201ENST00000383914 107 ntBASIC2.34□□□□□ -2.03
SF3B3Q15393 SNORA19-201ENST00000384737 128 ntBASIC2.34□□□□□ -2.03
SF3B3Q15393 MT-TT-201ENST00000387460 66 ntBASIC2.34□□□□□ -2.03
SF3B3Q15393 AL021397.1-201ENST00000451806 248 ntBASIC2.34□□□□□ -2.03
SF3B3Q15393 AC025033.1-201ENST00000463883 194 ntBASIC2.34□□□□□ -2.03
SF3B3Q15393 RPL23AP54-201ENST00000495129 419 ntBASIC2.34□□□□□ -2.03
SF3B3Q15393 RPL23AP63-201ENST00000498752 471 ntBASIC2.34□□□□□ -2.03
SF3B3Q15393 RNU6-1007P-201ENST00000516586 107 ntBASIC2.34□□□□□ -2.03
SF3B3Q15393 RNU7-121P-201ENST00000516604 62 ntBASIC2.34□□□□□ -2.03
SF3B3Q15393 NDUFA5P6-201ENST00000542110 379 ntBASIC2.34□□□□□ -2.03
SF3B3Q15393 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms