Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RPL23AP50-201ENST00000434149 455 ntBASIC0.58□□□□□ -2.32
VSX2P58304 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.58□□□□□ -2.32
VSX2P58304 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.58□□□□□ -2.32
VSX2P58304 AC105313.1-201ENST00000509121 353 ntBASIC0.58□□□□□ -2.32
VSX2P58304 RNU7-30P-201ENST00000516835 62 ntBASIC0.58□□□□□ -2.32
VSX2P58304 SNORA74.3-201ENST00000517108 154 ntBASIC0.58□□□□□ -2.32
VSX2P58304 MIR4762-201ENST00000585261 75 ntBASIC0.58□□□□□ -2.32
VSX2P58304 AL353765.1-201ENST00000605514 183 ntBASIC0.58□□□□□ -2.32
VSX2P58304 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
VSX2P58304 RNU6-1297P-201ENST00000384415 104 ntBASIC0.57□□□□□ -2.32
VSX2P58304 MIR520C-201ENST00000385005 87 ntBASIC0.57□□□□□ -2.32
VSX2P58304 AL031003.1-201ENST00000404229 172 ntBASIC0.57□□□□□ -2.32
VSX2P58304 SNRPGP10-201ENST00000432323 225 ntBASIC0.57□□□□□ -2.32
VSX2P58304 MTND4P17-201ENST00000470444 350 ntBASIC0.57□□□□□ -2.32
VSX2P58304 AC116353.2-201ENST00000505332 712 ntBASIC0.57□□□□□ -2.32
VSX2P58304 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.57□□□□□ -2.32
VSX2P58304 SNORA18.7-201ENST00000516910 131 ntBASIC0.57□□□□□ -2.32
VSX2P58304 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.57□□□□□ -2.32
VSX2P58304 AC109810.1-201ENST00000534066 224 ntBASIC0.57□□□□□ -2.32
VSX2P58304 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.57□□□□□ -2.32
VSX2P58304 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
VSX2P58304 PISRT1.1-201ENST00000616930 107 ntBASIC0.57□□□□□ -2.32
VSX2P58304 SEPT14P17-201ENST00000617978 177 ntBASIC0.57□□□□□ -2.32
VSX2P58304 MIR103A2-201ENST00000362154 78 ntBASIC0.56□□□□□ -2.32
VSX2P58304 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
VSX2P58304 RNU4-40P-201ENST00000364351 143 ntBASIC0.56□□□□□ -2.32
VSX2P58304 U8.5-201ENST00000364528 136 ntBASIC0.56□□□□□ -2.32
VSX2P58304 SNORD50B-201ENST00000364995 70 ntBASIC0.56□□□□□ -2.32
VSX2P58304 AC117470.1-201ENST00000381974 330 ntBASIC0.56□□□□□ -2.32
VSX2P58304 MIR452-201ENST00000385020 85 ntBASIC0.56□□□□□ -2.32
VSX2P58304 SNORD89-201ENST00000390981 114 ntBASIC0.56□□□□□ -2.32
VSX2P58304 MIR936-201ENST00000401264 98 ntBASIC0.56□□□□□ -2.32
VSX2P58304 RNU6-1156P-201ENST00000410365 100 ntBASIC0.56□□□□□ -2.32
VSX2P58304 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
VSX2P58304 MTCO2P27-201ENST00000420740 428 ntBASIC0.56□□□□□ -2.32
VSX2P58304 MTND4P28-201ENST00000426217 387 ntBASIC0.56□□□□□ -2.32
VSX2P58304 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.56□□□□□ -2.32
VSX2P58304 SNORD45.4-201ENST00000516629 73 ntBASIC0.56□□□□□ -2.32
VSX2P58304 AC060780.3-201ENST00000589464 80 ntBASIC0.56□□□□□ -2.32
VSX2P58304 AL512605.2-201ENST00000592972 256 ntBASIC0.56□□□□□ -2.32
VSX2P58304 AC240442.1-201ENST00000616055 283 ntBASIC0.56□□□□□ -2.32
VSX2P58304 AL669831.3-213ENST00000636676 183 ntBASIC0.56□□□□□ -2.32
VSX2P58304 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.56□□□□□ -2.32
VSX2P58304 AC073869.6-201ENST00000640656 341 ntBASIC0.56□□□□□ -2.32
VSX2P58304 Y_RNA.253-201ENST00000364562 112 ntBASIC0.55□□□□□ -2.32
VSX2P58304 RNU6-708P-201ENST00000384217 107 ntBASIC0.55□□□□□ -2.32
VSX2P58304 MIR1302-7-201ENST00000408841 72 ntBASIC0.55□□□□□ -2.32
VSX2P58304 Y_RNA.592-201ENST00000410274 109 ntBASIC0.55□□□□□ -2.32
VSX2P58304 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.55□□□□□ -2.32
VSX2P58304 SUMO1P2-201ENST00000452524 304 ntBASIC0.55□□□□□ -2.32
VSX2P58304 RN7SKP164-201ENST00000516138 266 ntBASIC0.55□□□□□ -2.32
VSX2P58304 RNU6-436P-201ENST00000516171 114 ntBASIC0.55□□□□□ -2.32
VSX2P58304 RNU6-358P-201ENST00000516564 75 ntBASIC0.55□□□□□ -2.32
VSX2P58304 MIR4764-201ENST00000580680 88 ntBASIC0.55□□□□□ -2.32
VSX2P58304 AC005899.2-201ENST00000584353 90 ntBASIC0.55□□□□□ -2.32
VSX2P58304 AC011476.5-201ENST00000615594 130 ntBASIC0.55□□□□□ -2.32
VSX2P58304 MIR6779-201ENST00000617283 64 ntBASIC0.55□□□□□ -2.32
VSX2P58304 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
VSX2P58304 RNU6-626P-201ENST00000363354 107 ntBASIC0.54□□□□□ -2.32
VSX2P58304 RNU6-20P-201ENST00000384106 107 ntBASIC0.54□□□□□ -2.32
VSX2P58304 RNY1P4-201ENST00000384595 115 ntBASIC0.54□□□□□ -2.32
VSX2P58304 MIR136-201ENST00000385207 82 ntBASIC0.54□□□□□ -2.32
VSX2P58304 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
VSX2P58304 SNORA69.1-201ENST00000390904 137 ntBASIC0.54□□□□□ -2.32
VSX2P58304 SNORD99-201ENST00000408612 74 ntBASIC0.54□□□□□ -2.32
VSX2P58304 RNU2-54P-201ENST00000410299 190 ntBASIC0.54□□□□□ -2.32
VSX2P58304 Y_RNA.646-201ENST00000410980 101 ntBASIC0.54□□□□□ -2.32
VSX2P58304 RNU2-61P-201ENST00000411069 191 ntBASIC0.54□□□□□ -2.32
VSX2P58304 RNU7-169P-201ENST00000459456 61 ntBASIC0.54□□□□□ -2.32
VSX2P58304 AC113410.1-201ENST00000505029 247 ntBASIC0.54□□□□□ -2.32
VSX2P58304 SNORA70.12-201ENST00000516084 153 ntBASIC0.54□□□□□ -2.32
VSX2P58304 AC036111.3-201ENST00000526389 112 ntBASIC0.54□□□□□ -2.32
VSX2P58304 AP003484.1-201ENST00000530974 250 ntBASIC0.54□□□□□ -2.32
VSX2P58304 RNU6-94P-201ENST00000607728 107 ntBASIC0.54□□□□□ -2.32
VSX2P58304 AC104465.1-201ENST00000611365 139 ntBASIC0.54□□□□□ -2.32
VSX2P58304 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
VSX2P58304 RNU6-1084P-201ENST00000362498 107 ntBASIC0.53□□□□□ -2.32
VSX2P58304 RNU6-654P-201ENST00000364373 107 ntBASIC0.53□□□□□ -2.32
VSX2P58304 FABP5P4-201ENST00000437203 171 ntBASIC0.53□□□□□ -2.32
VSX2P58304 COX6CP6-201ENST00000490840 228 ntBASIC0.53□□□□□ -2.32
VSX2P58304 AC005730.3-201ENST00000583067 366 ntBASIC0.53□□□□□ -2.32
VSX2P58304 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
VSX2P58304 Y_RNA.6-201ENST00000362350 114 ntBASIC0.52□□□□□ -2.33
VSX2P58304 RNA5SP499-201ENST00000363982 119 ntBASIC0.52□□□□□ -2.33
VSX2P58304 Y_RNA.446-201ENST00000384178 104 ntBASIC0.52□□□□□ -2.33
VSX2P58304 RNU6-310P-201ENST00000384655 107 ntBASIC0.52□□□□□ -2.33
VSX2P58304 MRPS18CP6-201ENST00000423587 223 ntBASIC0.52□□□□□ -2.33
VSX2P58304 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.52□□□□□ -2.33
VSX2P58304 AC092628.1-201ENST00000436250 252 ntBASIC0.52□□□□□ -2.33
VSX2P58304 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.52□□□□□ -2.33
VSX2P58304 SNORD123-201ENST00000459473 70 ntBASIC0.52□□□□□ -2.33
VSX2P58304 MIR2355-201ENST00000517199 87 ntBASIC0.52□□□□□ -2.33
VSX2P58304 MTND4LP26-201ENST00000518144 282 ntBASIC0.52□□□□□ -2.33
VSX2P58304 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.52□□□□□ -2.33
VSX2P58304 AC007742.2-201ENST00000618226 398 ntBASIC0.52□□□□□ -2.33
VSX2P58304 7SK.10-201ENST00000621414 298 ntBASIC0.52□□□□□ -2.33
VSX2P58304 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
VSX2P58304 Y_RNA.72-201ENST00000362894 103 ntBASIC0.51□□□□□ -2.33
VSX2P58304 Y_RNA.148-201ENST00000363557 117 ntBASIC0.51□□□□□ -2.33
VSX2P58304 RNU6-324P-201ENST00000363957 106 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms