Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 Y_RNA.376-201ENST00000365638 108 ntBASIC0.08□□□□□ -2.4
RAB38P57729 RNU6-700P-201ENST00000391043 107 ntBASIC0.08□□□□□ -2.4
RAB38P57729 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
RAB38P57729 RNU2-66P-201ENST00000410650 161 ntBASIC0.08□□□□□ -2.4
RAB38P57729 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.08□□□□□ -2.4
RAB38P57729 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.08□□□□□ -2.4
RAB38P57729 U8.22-201ENST00000459141 133 ntBASIC0.08□□□□□ -2.4
RAB38P57729 SNORA25.12-201ENST00000516202 82 ntBASIC0.08□□□□□ -2.4
RAB38P57729 AC022523.2-201ENST00000561045 150 ntBASIC0.08□□□□□ -2.4
RAB38P57729 RNU6-874P-201ENST00000362390 105 ntBASIC0.07□□□□□ -2.4
RAB38P57729 Y_RNA.36-201ENST00000362602 112 ntBASIC0.07□□□□□ -2.4
RAB38P57729 RNU6-318P-201ENST00000384283 103 ntBASIC0.07□□□□□ -2.4
RAB38P57729 Y_RNA.540-201ENST00000384638 111 ntBASIC0.07□□□□□ -2.4
RAB38P57729 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.07□□□□□ -2.4
RAB38P57729 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.07□□□□□ -2.4
RAB38P57729 snoU13.21-201ENST00000459368 105 ntBASIC0.07□□□□□ -2.4
RAB38P57729 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.07□□□□□ -2.4
RAB38P57729 SNORA62.5-201ENST00000516634 120 ntBASIC0.07□□□□□ -2.4
RAB38P57729 Y_RNA.714-201ENST00000517065 90 ntBASIC0.07□□□□□ -2.4
RAB38P57729 RNU2-12P-201ENST00000517216 168 ntBASIC0.07□□□□□ -2.4
RAB38P57729 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.07□□□□□ -2.4
RAB38P57729 RBM11P1-201ENST00000604951 799 ntBASIC0.07□□□□□ -2.4
RAB38P57729 MIR6128-201ENST00000615528 109 ntBASIC0.07□□□□□ -2.4
RAB38P57729 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.07□□□□□ -2.4
RAB38P57729 Y_RNA.38-201ENST00000362617 102 ntBASIC0.06□□□□□ -2.4
RAB38P57729 RNU6-934P-201ENST00000365154 107 ntBASIC0.06□□□□□ -2.4
RAB38P57729 MIR518A1-201ENST00000385068 85 ntBASIC0.06□□□□□ -2.4
RAB38P57729 RNU6-679P-201ENST00000391003 106 ntBASIC0.06□□□□□ -2.4
RAB38P57729 RNU2-54P-201ENST00000410299 190 ntBASIC0.06□□□□□ -2.4
RAB38P57729 SNORD5.1-201ENST00000458800 75 ntBASIC0.06□□□□□ -2.4
RAB38P57729 U8.19-201ENST00000459095 133 ntBASIC0.06□□□□□ -2.4
RAB38P57729 RNU6-864P-201ENST00000516256 108 ntBASIC0.06□□□□□ -2.4
RAB38P57729 AC005014.2-201ENST00000607795 599 ntBASIC0.06□□□□□ -2.4
RAB38P57729 Z99129.1-201ENST00000612510 255 ntBASIC0.06□□□□□ -2.4
RAB38P57729 MIR6718-201ENST00000616153 80 ntBASIC0.06□□□□□ -2.4
RAB38P57729 AC078938.1-201ENST00000620993 318 ntBASIC0.06□□□□□ -2.4
RAB38P57729 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.06□□□□□ -2.4
RAB38P57729 MIR377-201ENST00000362145 69 ntBASIC0.05□□□□□ -2.4
RAB38P57729 MIR330-201ENST00000362196 94 ntBASIC0.05□□□□□ -2.4
RAB38P57729 RNA5SP517-201ENST00000364724 117 ntBASIC0.05□□□□□ -2.4
RAB38P57729 RNU6-580P-201ENST00000365159 107 ntBASIC0.05□□□□□ -2.4
RAB38P57729 Y_RNA.358-201ENST00000365491 99 ntBASIC0.05□□□□□ -2.4
RAB38P57729 MIR570-201ENST00000384917 97 ntBASIC0.05□□□□□ -2.4
RAB38P57729 SNORD12B-201ENST00000410433 91 ntBASIC0.05□□□□□ -2.4
RAB38P57729 SNORA40.8-201ENST00000411034 126 ntBASIC0.05□□□□□ -2.4
RAB38P57729 SNORD71-201ENST00000411292 86 ntBASIC0.05□□□□□ -2.4
RAB38P57729 SNRPGP10-201ENST00000432323 225 ntBASIC0.05□□□□□ -2.4
RAB38P57729 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.05□□□□□ -2.4
RAB38P57729 AC116353.2-201ENST00000505332 712 ntBASIC0.05□□□□□ -2.4
RAB38P57729 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.05□□□□□ -2.4
RAB38P57729 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.05□□□□□ -2.4
RAB38P57729 AC105029.1-201ENST00000520250 669 ntBASIC0.05□□□□□ -2.4
RAB38P57729 AC005730.3-201ENST00000583067 366 ntBASIC0.05□□□□□ -2.4
RAB38P57729 AC004467.1-201ENST00000615678 330 ntBASIC0.05□□□□□ -2.4
RAB38P57729 MIR3974-201ENST00000637126 96 ntBASIC0.05□□□□□ -2.4
RAB38P57729 Y_RNA.476-201ENST00000384347 108 ntBASIC0.04□□□□□ -2.4
RAB38P57729 SNORD38C-201ENST00000384381 69 ntBASIC0.04□□□□□ -2.4
RAB38P57729 MT-TN-201ENST00000387400 73 ntBASIC0.04□□□□□ -2.4
RAB38P57729 AL031003.1-201ENST00000404229 172 ntBASIC0.04□□□□□ -2.4
RAB38P57729 AC015818.7-201ENST00000428754 109 ntBASIC0.04□□□□□ -2.4
RAB38P57729 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.04□□□□□ -2.4
RAB38P57729 AC087499.7-201ENST00000441958 109 ntBASIC0.04□□□□□ -2.4
RAB38P57729 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.04□□□□□ -2.4
RAB38P57729 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.04□□□□□ -2.4
RAB38P57729 RNU6-1088P-201ENST00000516850 104 ntBASIC0.04□□□□□ -2.4
RAB38P57729 MIR1273G-201ENST00000577677 100 ntBASIC0.04□□□□□ -2.4
RAB38P57729 MIR4771-2-201ENST00000577758 74 ntBASIC0.04□□□□□ -2.4
RAB38P57729 MIR548AO-201ENST00000579992 96 ntBASIC0.04□□□□□ -2.4
RAB38P57729 MIR4771-1-201ENST00000582617 74 ntBASIC0.04□□□□□ -2.4
RAB38P57729 Y_RNA.172-201ENST00000363765 102 ntBASIC0.03□□□□□ -2.4
RAB38P57729 SNORD45.3-201ENST00000363836 72 ntBASIC0.03□□□□□ -2.4
RAB38P57729 SNORD14E-201ENST00000364009 85 ntBASIC0.03□□□□□ -2.4
RAB38P57729 SNORA51.10-201ENST00000384418 136 ntBASIC0.03□□□□□ -2.4
RAB38P57729 MTND1P17-201ENST00000448961 204 ntBASIC0.03□□□□□ -2.4
RAB38P57729 RNU6-408P-201ENST00000515910 100 ntBASIC0.03□□□□□ -2.4
RAB38P57729 EIF1P4-201ENST00000572664 335 ntBASIC0.03□□□□□ -2.4
RAB38P57729 MIR4804-201ENST00000581683 73 ntBASIC0.03□□□□□ -2.4
RAB38P57729 AP000753.3-201ENST00000604083 169 ntBASIC0.03□□□□□ -2.4
RAB38P57729 AC005972.2-201ENST00000604690 348 ntBASIC0.03□□□□□ -2.4
RAB38P57729 AC090617.10-201ENST00000624308 134 ntBASIC0.03□□□□□ -2.4
RAB38P57729 MIR3662-201ENST00000637030 95 ntBASIC0.03□□□□□ -2.4
RAB38P57729 MIR1321-201ENST00000637766 79 ntBASIC0.03□□□□□ -2.4
RAB38P57729 SNORA72-201ENST00000384339 132 ntBASIC0.02□□□□□ -2.41
RAB38P57729 RNU6-205P-201ENST00000390858 107 ntBASIC0.02□□□□□ -2.41
RAB38P57729 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.02□□□□□ -2.41
RAB38P57729 MTCO2P27-201ENST00000420740 428 ntBASIC0.02□□□□□ -2.41
RAB38P57729 RNU6-566P-201ENST00000516790 107 ntBASIC0.02□□□□□ -2.41
RAB38P57729 AP003327.1-201ENST00000529684 127 ntBASIC0.02□□□□□ -2.41
RAB38P57729 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.02□□□□□ -2.41
RAB38P57729 AC006380.1-201ENST00000603598 186 ntBASIC0.02□□□□□ -2.41
RAB38P57729 LARP7P1-201ENST00000605576 316 ntBASIC0.02□□□□□ -2.41
RAB38P57729 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.02□□□□□ -2.41
RAB38P57729 MIR4315-1-201ENST00000636800 73 ntBASIC0.02□□□□□ -2.41
RAB38P57729 MIR4315-2-201ENST00000640925 73 ntBASIC0.02□□□□□ -2.41
RAB38P57729 SNORD114-26-201ENST00000363543 72 ntBASIC0.01□□□□□ -2.41
RAB38P57729 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
RAB38P57729 RNU6-1013P-201ENST00000384180 107 ntBASIC0.01□□□□□ -2.41
RAB38P57729 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.01□□□□□ -2.41
RAB38P57729 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.01□□□□□ -2.41
RAB38P57729 RNU6-863P-201ENST00000515989 104 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 212.6 ms