Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 Y_RNA.253-201ENST00000364562 112 ntBASIC2□□□□□ -2.09
SUMO3P55854 Y_RNA.515-201ENST00000384535 112 ntBASIC2□□□□□ -2.09
SUMO3P55854 MIR626-201ENST00000385032 94 ntBASIC2□□□□□ -2.09
SUMO3P55854 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2□□□□□ -2.09
SUMO3P55854 RNU6-847P-201ENST00000411115 108 ntBASIC2□□□□□ -2.09
SUMO3P55854 AL139156.1-201ENST00000412785 841 ntBASIC2□□□□□ -2.09
SUMO3P55854 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2□□□□□ -2.09
SUMO3P55854 STAG3L5P-204ENST00000443759 179 ntBASIC2□□□□□ -2.09
SUMO3P55854 RNU7-34P-201ENST00000459394 64 ntBASIC2□□□□□ -2.09
SUMO3P55854 OR9P1P-201ENST00000496431 281 ntBASIC2□□□□□ -2.09
SUMO3P55854 MRPS17P9-201ENST00000511924 393 ntBASIC2□□□□□ -2.09
SUMO3P55854 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2□□□□□ -2.09
SUMO3P55854 AC009779.6-201ENST00000603972 165 ntBASIC2□□□□□ -2.09
SUMO3P55854 AL591926.4-201ENST00000616895 298 ntBASIC2□□□□□ -2.09
SUMO3P55854 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2□□□□□ -2.09
SUMO3P55854 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
SUMO3P55854 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SUMO3P55854 RNA5SP496-201ENST00000391240 109 ntBASIC1.99□□□□□ -2.09
SUMO3P55854 Y_RNA.626-201ENST00000411288 95 ntBASIC1.99□□□□□ -2.09
SUMO3P55854 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.99□□□□□ -2.09
SUMO3P55854 Y_RNA.714-201ENST00000517065 90 ntBASIC1.99□□□□□ -2.09
SUMO3P55854 AC100767.1-201ENST00000528178 123 ntBASIC1.99□□□□□ -2.09
SUMO3P55854 MIR1273D-201ENST00000577266 86 ntBASIC1.99□□□□□ -2.09
SUMO3P55854 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.99□□□□□ -2.09
SUMO3P55854 AC078938.1-201ENST00000620993 318 ntBASIC1.99□□□□□ -2.09
SUMO3P55854 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.99□□□□□ -2.09
SUMO3P55854 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SUMO3P55854 MIR126-201ENST00000362291 85 ntBASIC1.98□□□□□ -2.09
SUMO3P55854 RNU6-653P-201ENST00000363074 106 ntBASIC1.98□□□□□ -2.09
SUMO3P55854 RNU6-1209P-201ENST00000363655 107 ntBASIC1.98□□□□□ -2.09
SUMO3P55854 Y_RNA.796-201ENST00000364268 102 ntBASIC1.98□□□□□ -2.09
SUMO3P55854 Y_RNA.799-201ENST00000364992 102 ntBASIC1.98□□□□□ -2.09
SUMO3P55854 RNU6-969P-201ENST00000383900 105 ntBASIC1.98□□□□□ -2.09
SUMO3P55854 RNU6-383P-201ENST00000410864 94 ntBASIC1.98□□□□□ -2.09
SUMO3P55854 RPL30P13-201ENST00000418873 348 ntBASIC1.98□□□□□ -2.09
SUMO3P55854 SNRPGP10-201ENST00000432323 225 ntBASIC1.98□□□□□ -2.09
SUMO3P55854 SNORA59A-201ENST00000459326 152 ntBASIC1.98□□□□□ -2.09
SUMO3P55854 MIR514B-201ENST00000516774 80 ntBASIC1.98□□□□□ -2.09
SUMO3P55854 MIR4513-201ENST00000581077 86 ntBASIC1.98□□□□□ -2.09
SUMO3P55854 MIR4762-201ENST00000585261 75 ntBASIC1.98□□□□□ -2.09
SUMO3P55854 AL096840.1-201ENST00000603287 93 ntBASIC1.98□□□□□ -2.09
SUMO3P55854 AC021506.2-201ENST00000612354 169 ntBASIC1.98□□□□□ -2.09
SUMO3P55854 JPX_2.1-201ENST00000614161 69 ntBASIC1.98□□□□□ -2.09
SUMO3P55854 MIR6873-201ENST00000622788 63 ntBASIC1.98□□□□□ -2.09
SUMO3P55854 RNU6-414P-201ENST00000363705 104 ntBASIC1.97□□□□□ -2.09
SUMO3P55854 Y_RNA.199-201ENST00000364014 102 ntBASIC1.97□□□□□ -2.09
SUMO3P55854 Y_RNA.200-201ENST00000364018 102 ntBASIC1.97□□□□□ -2.09
SUMO3P55854 U8.5-201ENST00000364528 136 ntBASIC1.97□□□□□ -2.09
SUMO3P55854 Y_RNA.257-201ENST00000364596 102 ntBASIC1.97□□□□□ -2.09
SUMO3P55854 SNORA80E-201ENST00000384744 137 ntBASIC1.97□□□□□ -2.09
SUMO3P55854 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SUMO3P55854 SNORA12.1-201ENST00000390873 148 ntBASIC1.97□□□□□ -2.09
SUMO3P55854 MIR1298-201ENST00000408783 112 ntBASIC1.97□□□□□ -2.09
SUMO3P55854 RNA5SP425-201ENST00000410336 112 ntBASIC1.97□□□□□ -2.09
SUMO3P55854 RN7SKP192-201ENST00000411291 327 ntBASIC1.97□□□□□ -2.09
SUMO3P55854 RNA5SP508-201ENST00000411327 119 ntBASIC1.97□□□□□ -2.09
SUMO3P55854 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.97□□□□□ -2.09
SUMO3P55854 AC099513.1-201ENST00000490423 301 ntBASIC1.97□□□□□ -2.09
SUMO3P55854 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SUMO3P55854 ZNF658B-202ENST00000615961 3375 ntBASIC1.97□□□□□ -2.09
SUMO3P55854 Y_RNA.24-201ENST00000362508 103 ntBASIC1.96□□□□□ -2.1
SUMO3P55854 SNORD68-201ENST00000363214 84 ntBASIC1.96□□□□□ -2.1
SUMO3P55854 RNU4-10P-201ENST00000364383 140 ntBASIC1.96□□□□□ -2.1
SUMO3P55854 MIR522-201ENST00000385071 87 ntBASIC1.96□□□□□ -2.1
SUMO3P55854 JTBP1-201ENST00000441314 247 ntBASIC1.96□□□□□ -2.1
SUMO3P55854 AC104435.1-201ENST00000483483 166 ntBASIC1.96□□□□□ -2.1
SUMO3P55854 RNU6-1007P-201ENST00000516586 107 ntBASIC1.96□□□□□ -2.1
SUMO3P55854 RPL23AP91-201ENST00000569211 455 ntBASIC1.96□□□□□ -2.1
SUMO3P55854 AC103810.8-201ENST00000607347 118 ntBASIC1.96□□□□□ -2.1
SUMO3P55854 AL513423.1-201ENST00000621695 132 ntBASIC1.96□□□□□ -2.1
SUMO3P55854 AC064859.1-201ENST00000624741 174 ntBASIC1.96□□□□□ -2.1
SUMO3P55854 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SUMO3P55854 MIR1278-201ENST00000408753 81 ntBASIC1.95□□□□□ -2.1
SUMO3P55854 RN7SKP101-201ENST00000411376 320 ntBASIC1.95□□□□□ -2.1
SUMO3P55854 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.95□□□□□ -2.1
SUMO3P55854 PGBD4P5-201ENST00000445958 426 ntBASIC1.95□□□□□ -2.1
SUMO3P55854 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.94□□□□□ -2.1
SUMO3P55854 AL359851.1-201ENST00000569460 4997 ntBASIC1.94□□□□□ -2.1
SUMO3P55854 MIRLET7C-201ENST00000362160 84 ntBASIC1.94□□□□□ -2.1
SUMO3P55854 Y_RNA.83-201ENST00000363005 113 ntBASIC1.94□□□□□ -2.1
SUMO3P55854 RNA5SP37-201ENST00000365420 130 ntBASIC1.94□□□□□ -2.1
SUMO3P55854 RNU6-424P-201ENST00000384367 105 ntBASIC1.94□□□□□ -2.1
SUMO3P55854 MIR194-1-201ENST00000384892 85 ntBASIC1.94□□□□□ -2.1
SUMO3P55854 RNU6-131P-201ENST00000391144 107 ntBASIC1.94□□□□□ -2.1
SUMO3P55854 MLLT10P1-201ENST00000418346 262 ntBASIC1.94□□□□□ -2.1
SUMO3P55854 AC023449.1-201ENST00000454464 154 ntBASIC1.94□□□□□ -2.1
SUMO3P55854 SNORD11-201ENST00000459124 84 ntBASIC1.94□□□□□ -2.1
SUMO3P55854 RPL23AP42-201ENST00000471152 471 ntBASIC1.94□□□□□ -2.1
SUMO3P55854 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.94□□□□□ -2.1
SUMO3P55854 AC008413.1-201ENST00000511864 177 ntBASIC1.94□□□□□ -2.1
SUMO3P55854 RNA5SP168-201ENST00000516642 112 ntBASIC1.94□□□□□ -2.1
SUMO3P55854 SNORA44.1-201ENST00000517031 108 ntBASIC1.94□□□□□ -2.1
SUMO3P55854 AC130289.1-201ENST00000577321 73 ntBASIC1.94□□□□□ -2.1
SUMO3P55854 AC087685.1-201ENST00000587507 141 ntBASIC1.94□□□□□ -2.1
SUMO3P55854 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.94□□□□□ -2.1
SUMO3P55854 AL021707.8-201ENST00000609428 183 ntBASIC1.94□□□□□ -2.1
SUMO3P55854 MIR8074-201ENST00000615081 81 ntBASIC1.94□□□□□ -2.1
SUMO3P55854 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SUMO3P55854 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SUMO3P55854 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms