Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 Y_RNA.655-201ENST00000515919 96 ntBASIC0.47□□□□□ -2.33
HLA-DMAP28067 AC004812.1-201ENST00000540773 146 ntBASIC0.47□□□□□ -2.33
HLA-DMAP28067 AC133485.1-201ENST00000567176 124 ntBASIC0.47□□□□□ -2.33
HLA-DMAP28067 AC138907.6-201ENST00000568401 126 ntBASIC0.47□□□□□ -2.33
HLA-DMAP28067 AC005899.2-201ENST00000584353 90 ntBASIC0.47□□□□□ -2.33
HLA-DMAP28067 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.47□□□□□ -2.33
HLA-DMAP28067 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
HLA-DMAP28067 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
HLA-DMAP28067 RNU6-1084P-201ENST00000362498 107 ntBASIC0.46□□□□□ -2.34
HLA-DMAP28067 RNU6-324P-201ENST00000363957 106 ntBASIC0.46□□□□□ -2.34
HLA-DMAP28067 SNORD28B-201ENST00000390993 75 ntBASIC0.46□□□□□ -2.34
HLA-DMAP28067 RNA5SP95-201ENST00000410319 137 ntBASIC0.46□□□□□ -2.34
HLA-DMAP28067 Y_RNA.599-201ENST00000410489 109 ntBASIC0.46□□□□□ -2.34
HLA-DMAP28067 CHEK2P4-201ENST00000450340 246 ntBASIC0.46□□□□□ -2.34
HLA-DMAP28067 SUMO1P2-201ENST00000452524 304 ntBASIC0.46□□□□□ -2.34
HLA-DMAP28067 MTCO3P10-201ENST00000455912 772 ntBASIC0.46□□□□□ -2.34
HLA-DMAP28067 AC036111.3-201ENST00000526389 112 ntBASIC0.46□□□□□ -2.34
HLA-DMAP28067 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
HLA-DMAP28067 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.46□□□□□ -2.34
HLA-DMAP28067 RNU6-845P-201ENST00000362578 103 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 Y_RNA.72-201ENST00000362894 103 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 Y_RNA.148-201ENST00000363557 117 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 RNU6-1188P-201ENST00000363795 107 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 Y_RNA.368-201ENST00000365547 113 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 RNU6-890P-201ENST00000384121 107 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 RNU6-767P-201ENST00000384132 107 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 Y_RNA.577-201ENST00000384794 101 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 MIR570-201ENST00000384917 97 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 RNU6-370P-201ENST00000411008 104 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 SNORD123-201ENST00000459473 70 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.45□□□□□ -2.34
HLA-DMAP28067 AC113410.1-201ENST00000505029 247 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 SNORA70.12-201ENST00000516084 153 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 RNU6-155P-201ENST00000516347 100 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.45□□□□□ -2.34
HLA-DMAP28067 MIR548AR-201ENST00000582191 57 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 AC006380.1-201ENST00000603598 186 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 7SK.10-201ENST00000621414 298 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 AC098679.4-201ENST00000624241 654 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 AC138305.3-201ENST00000624988 240 ntBASIC0.45□□□□□ -2.34
HLA-DMAP28067 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
HLA-DMAP28067 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
HLA-DMAP28067 Y_RNA.146-201ENST00000363549 102 ntBASIC0.44□□□□□ -2.34
HLA-DMAP28067 SNORD81.2-201ENST00000365153 76 ntBASIC0.44□□□□□ -2.34
HLA-DMAP28067 Y_RNA.329-201ENST00000365209 107 ntBASIC0.44□□□□□ -2.34
HLA-DMAP28067 SNORA75.6-201ENST00000391318 127 ntBASIC0.44□□□□□ -2.34
HLA-DMAP28067 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.44□□□□□ -2.34
HLA-DMAP28067 AL392103.1-201ENST00000447000 198 ntBASIC0.44□□□□□ -2.34
HLA-DMAP28067 RNU6-470P-201ENST00000515954 104 ntBASIC0.44□□□□□ -2.34
HLA-DMAP28067 Y_RNA.691-201ENST00000516611 103 ntBASIC0.44□□□□□ -2.34
HLA-DMAP28067 MIR2355-201ENST00000517199 87 ntBASIC0.44□□□□□ -2.34
HLA-DMAP28067 MTND4LP26-201ENST00000518144 282 ntBASIC0.44□□□□□ -2.34
HLA-DMAP28067 MIR4659A-201ENST00000580269 81 ntBASIC0.44□□□□□ -2.34
HLA-DMAP28067 AC005176.2-201ENST00000596933 147 ntBASIC0.44□□□□□ -2.34
HLA-DMAP28067 AC005972.2-201ENST00000604690 348 ntBASIC0.44□□□□□ -2.34
HLA-DMAP28067 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.44□□□□□ -2.34
HLA-DMAP28067 MIR6516-201ENST00000630554 81 ntBASIC0.44□□□□□ -2.34
HLA-DMAP28067 AC134026.1-201ENST00000623249 2239 ntBASIC0.44□□□□□ -2.34
HLA-DMAP28067 AC027514.1-201ENST00000588561 1603 ntBASIC0.43□□□□□ -2.34
HLA-DMAP28067 Y_RNA.160-201ENST00000363677 92 ntBASIC0.43□□□□□ -2.34
HLA-DMAP28067 Y_RNA.164-201ENST00000363709 102 ntBASIC0.43□□□□□ -2.34
HLA-DMAP28067 Y_RNA.191-201ENST00000363972 113 ntBASIC0.43□□□□□ -2.34
HLA-DMAP28067 RNU1-93P-201ENST00000364704 169 ntBASIC0.43□□□□□ -2.34
HLA-DMAP28067 Y_RNA.279-201ENST00000364763 95 ntBASIC0.43□□□□□ -2.34
HLA-DMAP28067 SNORA25.9-201ENST00000365087 128 ntBASIC0.43□□□□□ -2.34
HLA-DMAP28067 SNORD14.1-201ENST00000365609 90 ntBASIC0.43□□□□□ -2.34
HLA-DMAP28067 MIR625-201ENST00000385047 85 ntBASIC0.43□□□□□ -2.34
HLA-DMAP28067 FCF1P4-201ENST00000448326 183 ntBASIC0.43□□□□□ -2.34
HLA-DMAP28067 U7.7-201ENST00000459276 60 ntBASIC0.43□□□□□ -2.34
HLA-DMAP28067 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.43□□□□□ -2.34
HLA-DMAP28067 AC012433.1-201ENST00000588916 398 ntBASIC0.43□□□□□ -2.34
HLA-DMAP28067 AC136443.5-201ENST00000603741 370 ntBASIC0.43□□□□□ -2.34
HLA-DMAP28067 TPTEP1-208ENST00000636884 213 ntBASIC0.43□□□□□ -2.34
HLA-DMAP28067 Y_RNA.474-201ENST00000384341 102 ntBASIC0.42□□□□□ -2.34
HLA-DMAP28067 RNY3P4-201ENST00000384428 101 ntBASIC0.42□□□□□ -2.34
HLA-DMAP28067 MT-TL1-201ENST00000386347 75 ntBASIC0.42□□□□□ -2.34
HLA-DMAP28067 FCF1P9-201ENST00000412546 282 ntBASIC0.42□□□□□ -2.34
HLA-DMAP28067 RNU6-264P-201ENST00000517134 104 ntBASIC0.42□□□□□ -2.34
HLA-DMAP28067 CYP3A137P-201ENST00000562436 69 ntBASIC0.42□□□□□ -2.34
HLA-DMAP28067 AC022441.3-201ENST00000605737 136 ntBASIC0.42□□□□□ -2.34
HLA-DMAP28067 SNORD81.1-201ENST00000363064 77 ntBASIC0.41□□□□□ -2.34
HLA-DMAP28067 snoU2-30.1-201ENST00000365012 70 ntBASIC0.41□□□□□ -2.34
HLA-DMAP28067 Y_RNA.310-201ENST00000365063 113 ntBASIC0.41□□□□□ -2.34
HLA-DMAP28067 SNORD114-22-201ENST00000365423 72 ntBASIC0.41□□□□□ -2.34
HLA-DMAP28067 RNY1P8-201ENST00000383970 114 ntBASIC0.41□□□□□ -2.34
HLA-DMAP28067 SNORA72-201ENST00000384339 132 ntBASIC0.41□□□□□ -2.34
HLA-DMAP28067 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.41□□□□□ -2.34
HLA-DMAP28067 RNU6-131P-201ENST00000391144 107 ntBASIC0.41□□□□□ -2.34
HLA-DMAP28067 AL590004.1-201ENST00000405321 300 ntBASIC0.41□□□□□ -2.34
HLA-DMAP28067 MIR1278-201ENST00000408753 81 ntBASIC0.41□□□□□ -2.34
HLA-DMAP28067 Y_RNA.605-201ENST00000410577 105 ntBASIC0.41□□□□□ -2.34
HLA-DMAP28067 AC244098.3-201ENST00000424803 96 ntBASIC0.41□□□□□ -2.34
HLA-DMAP28067 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.41□□□□□ -2.34
HLA-DMAP28067 RPS29P1-201ENST00000465274 159 ntBASIC0.41□□□□□ -2.34
HLA-DMAP28067 AC010655.3-201ENST00000478818 450 ntBASIC0.41□□□□□ -2.34
HLA-DMAP28067 RNU6-307P-201ENST00000516743 106 ntBASIC0.41□□□□□ -2.34
HLA-DMAP28067 MIR6504-201ENST00000613520 61 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms