Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 Y_RNA.77-201ENST00000362962 107 ntBASIC0.03□□□□□ -2.4
SRMP19623 Y_RNA.85-201ENST00000363014 111 ntBASIC0.03□□□□□ -2.4
SRMP19623 RNA5SP127-201ENST00000411051 133 ntBASIC0.03□□□□□ -2.4
SRMP19623 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.03□□□□□ -2.4
SRMP19623 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.03□□□□□ -2.4
SRMP19623 EIF1P4-201ENST00000572664 335 ntBASIC0.03□□□□□ -2.4
SRMP19623 MIR5701-3-201ENST00000578890 82 ntBASIC0.03□□□□□ -2.4
SRMP19623 MIR4760-201ENST00000585040 80 ntBASIC0.03□□□□□ -2.4
SRMP19623 MIR5701-1-201ENST00000585138 82 ntBASIC0.03□□□□□ -2.4
SRMP19623 AC006380.1-201ENST00000603598 186 ntBASIC0.03□□□□□ -2.4
SRMP19623 MIR5701-2-201ENST00000615634 82 ntBASIC0.03□□□□□ -2.4
SRMP19623 AC240442.1-201ENST00000616055 283 ntBASIC0.03□□□□□ -2.4
SRMP19623 AC078938.1-201ENST00000620993 318 ntBASIC0.03□□□□□ -2.4
SRMP19623 AC090582.1-201ENST00000636321 199 ntBASIC0.03□□□□□ -2.4
SRMP19623 Y_RNA.148-201ENST00000363557 117 ntBASIC0.02□□□□□ -2.41
SRMP19623 SNORD14E-201ENST00000364009 85 ntBASIC0.02□□□□□ -2.41
SRMP19623 Y_RNA.256-201ENST00000364594 104 ntBASIC0.02□□□□□ -2.41
SRMP19623 RNU6-259P-201ENST00000383999 107 ntBASIC0.02□□□□□ -2.41
SRMP19623 Y_RNA.557-201ENST00000384680 107 ntBASIC0.02□□□□□ -2.41
SRMP19623 MIR7-2-201ENST00000384970 110 ntBASIC0.02□□□□□ -2.41
SRMP19623 RNU2-54P-201ENST00000410299 190 ntBASIC0.02□□□□□ -2.41
SRMP19623 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.02□□□□□ -2.41
SRMP19623 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.02□□□□□ -2.41
SRMP19623 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.02□□□□□ -2.41
SRMP19623 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
SRMP19623 RNY1P16-201ENST00000363063 111 ntBASIC0.01□□□□□ -2.41
SRMP19623 SNORD50B-201ENST00000364995 70 ntBASIC0.01□□□□□ -2.41
SRMP19623 Y_RNA.368-201ENST00000365547 113 ntBASIC0.01□□□□□ -2.41
SRMP19623 RNU6-679P-201ENST00000391003 106 ntBASIC0.01□□□□□ -2.41
SRMP19623 DEFB108C-201ENST00000400154 252 ntBASIC0.01□□□□□ -2.41
SRMP19623 RNU6-908P-201ENST00000410160 94 ntBASIC0.01□□□□□ -2.41
SRMP19623 SNORD83.1-201ENST00000411362 77 ntBASIC0.01□□□□□ -2.41
SRMP19623 SNRPGP10-201ENST00000432323 225 ntBASIC0.01□□□□□ -2.41
SRMP19623 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.01□□□□□ -2.41
SRMP19623 AC092989.1-201ENST00000481235 277 ntBASIC0.01□□□□□ -2.41
SRMP19623 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.01□□□□□ -2.41
SRMP19623 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.01□□□□□ -2.41
SRMP19623 MIR548AO-201ENST00000579992 96 ntBASIC0.01□□□□□ -2.41
SRMP19623 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0□□□□□ -2.41
SRMP19623 RNA5SP457-201ENST00000363657 124 ntBASIC0□□□□□ -2.41
SRMP19623 SNORD115-30-201ENST00000364117 82 ntBASIC0□□□□□ -2.41
SRMP19623 RNU6-1013P-201ENST00000384180 107 ntBASIC0□□□□□ -2.41
SRMP19623 RNU6-332P-201ENST00000391193 108 ntBASIC0□□□□□ -2.41
SRMP19623 AL358176.2-201ENST00000425769 204 ntBASIC0□□□□□ -2.41
SRMP19623 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0□□□□□ -2.41
SRMP19623 RNU6-329P-201ENST00000459618 107 ntBASIC0□□□□□ -2.41
SRMP19623 RNA5SP330-201ENST00000517096 96 ntBASIC0□□□□□ -2.41
SRMP19623 RNU2-12P-201ENST00000517216 168 ntBASIC0□□□□□ -2.41
SRMP19623 LARP7P1-201ENST00000605576 316 ntBASIC0□□□□□ -2.41
SRMP19623 MIR6779-201ENST00000617283 64 ntBASIC0□□□□□ -2.41
SRMP19623 AC078883.4-201ENST00000623218 367 ntBASIC0□□□□□ -2.41
SRMP19623 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.01□□□□□ -2.41
SRMP19623 RNU6-483P-201ENST00000384088 108 ntBASIC-0.01□□□□□ -2.41
SRMP19623 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.01□□□□□ -2.41
SRMP19623 SNORA51.10-201ENST00000384418 136 ntBASIC-0.01□□□□□ -2.41
SRMP19623 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.01□□□□□ -2.41
SRMP19623 AC073261.1-201ENST00000429409 121 ntBASIC-0.01□□□□□ -2.41
SRMP19623 USP9YP30-201ENST00000430729 455 ntBASIC-0.01□□□□□ -2.41
SRMP19623 SNORD5.1-201ENST00000458800 75 ntBASIC-0.01□□□□□ -2.41
SRMP19623 SNORA25.10-201ENST00000515926 124 ntBASIC-0.01□□□□□ -2.41
SRMP19623 RNU6-830P-201ENST00000516353 107 ntBASIC-0.01□□□□□ -2.41
SRMP19623 Y_RNA.717-201ENST00000517106 92 ntBASIC-0.01□□□□□ -2.41
SRMP19623 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
SRMP19623 MIR4804-201ENST00000581683 73 ntBASIC-0.01□□□□□ -2.41
SRMP19623 AC005972.2-201ENST00000604690 348 ntBASIC-0.01□□□□□ -2.41
SRMP19623 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.01□□□□□ -2.41
SRMP19623 MIR411-201ENST00000362239 96 ntBASIC-0.02□□□□□ -2.41
SRMP19623 SNORA42.1-201ENST00000363515 137 ntBASIC-0.02□□□□□ -2.41
SRMP19623 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.02□□□□□ -2.41
SRMP19623 RNY3P3-201ENST00000363816 102 ntBASIC-0.02□□□□□ -2.41
SRMP19623 RNA5SP517-201ENST00000364724 117 ntBASIC-0.02□□□□□ -2.41
SRMP19623 SNORA72-201ENST00000384339 132 ntBASIC-0.02□□□□□ -2.41
SRMP19623 SNORD28B-201ENST00000390993 75 ntBASIC-0.02□□□□□ -2.41
SRMP19623 MIR1197-201ENST00000408818 88 ntBASIC-0.02□□□□□ -2.41
SRMP19623 RNU6-373P-201ENST00000411247 98 ntBASIC-0.02□□□□□ -2.41
SRMP19623 AL139396.1-201ENST00000421137 167 ntBASIC-0.02□□□□□ -2.41
SRMP19623 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.02□□□□□ -2.41
SRMP19623 SCARNA8-201ENST00000515924 131 ntBASIC-0.02□□□□□ -2.41
SRMP19623 AC069113.3-201ENST00000521019 150 ntBASIC-0.02□□□□□ -2.41
SRMP19623 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.02□□□□□ -2.41
SRMP19623 MIR4771-2-201ENST00000577758 74 ntBASIC-0.02□□□□□ -2.41
SRMP19623 MIR4771-1-201ENST00000582617 74 ntBASIC-0.02□□□□□ -2.41
SRMP19623 MIR4264-201ENST00000583520 66 ntBASIC-0.02□□□□□ -2.41
SRMP19623 AC087685.1-201ENST00000587507 141 ntBASIC-0.02□□□□□ -2.41
SRMP19623 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
SRMP19623 RNU6-842P-201ENST00000384269 107 ntBASIC-0.03□□□□□ -2.41
SRMP19623 MIR802-201ENST00000390235 94 ntBASIC-0.03□□□□□ -2.41
SRMP19623 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.03□□□□□ -2.41
SRMP19623 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.03□□□□□ -2.41
SRMP19623 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.03□□□□□ -2.41
SRMP19623 AC019235.1-201ENST00000503847 207 ntBASIC-0.03□□□□□ -2.41
SRMP19623 AC105029.1-201ENST00000520250 669 ntBASIC-0.03□□□□□ -2.41
SRMP19623 Pinc.1-201ENST00000616452 154 ntBASIC-0.03□□□□□ -2.41
SRMP19623 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
SRMP19623 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.04□□□□□ -2.42
SRMP19623 SNORD118-201ENST00000363593 134 ntBASIC-0.04□□□□□ -2.42
SRMP19623 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.04□□□□□ -2.42
SRMP19623 SNORA1.2-201ENST00000365189 134 ntBASIC-0.04□□□□□ -2.42
SRMP19623 SNORD116-8-201ENST00000384365 95 ntBASIC-0.04□□□□□ -2.42
SRMP19623 MTCO2P33-201ENST00000402100 465 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms