Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RNU6-1199P-201ENST00000411249 104 ntBASIC0.52□□□□□ -2.33
CD28P10747 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.52□□□□□ -2.33
CD28P10747 PIGPP3-201ENST00000425307 415 ntBASIC0.52□□□□□ -2.33
CD28P10747 FABP5P4-201ENST00000437203 171 ntBASIC0.52□□□□□ -2.33
CD28P10747 RNU6-408P-201ENST00000515910 100 ntBASIC0.52□□□□□ -2.33
CD28P10747 SNORA25.10-201ENST00000515926 124 ntBASIC0.52□□□□□ -2.33
CD28P10747 RN7SKP164-201ENST00000516138 266 ntBASIC0.52□□□□□ -2.33
CD28P10747 MTND4LP26-201ENST00000518144 282 ntBASIC0.52□□□□□ -2.33
CD28P10747 AL353765.1-201ENST00000605514 183 ntBASIC0.52□□□□□ -2.33
CD28P10747 SEPT14P17-201ENST00000617978 177 ntBASIC0.52□□□□□ -2.33
CD28P10747 SNORD68-201ENST00000363214 84 ntBASIC0.51□□□□□ -2.33
CD28P10747 Y_RNA.253-201ENST00000364562 112 ntBASIC0.51□□□□□ -2.33
CD28P10747 RNY3P4-201ENST00000384428 101 ntBASIC0.51□□□□□ -2.33
CD28P10747 RNU6-136P-201ENST00000384663 107 ntBASIC0.51□□□□□ -2.33
CD28P10747 MIR15B-201ENST00000385045 98 ntBASIC0.51□□□□□ -2.33
CD28P10747 MIR522-201ENST00000385071 87 ntBASIC0.51□□□□□ -2.33
CD28P10747 MIR605-201ENST00000385078 83 ntBASIC0.51□□□□□ -2.33
CD28P10747 AL035398.1-201ENST00000430869 322 ntBASIC0.51□□□□□ -2.33
CD28P10747 AC098869.1-201ENST00000481627 292 ntBASIC0.51□□□□□ -2.33
CD28P10747 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.51□□□□□ -2.33
CD28P10747 AC068790.6-201ENST00000602558 258 ntBASIC0.51□□□□□ -2.33
CD28P10747 RBM11P1-201ENST00000604951 799 ntBASIC0.51□□□□□ -2.33
CD28P10747 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.51□□□□□ -2.33
CD28P10747 PISRT1.1-201ENST00000616930 107 ntBASIC0.51□□□□□ -2.33
CD28P10747 AL669831.3-213ENST00000636676 183 ntBASIC0.51□□□□□ -2.33
CD28P10747 AC073869.6-201ENST00000640656 341 ntBASIC0.51□□□□□ -2.33
CD28P10747 Y_RNA.101-201ENST00000363154 102 ntBASIC0.5□□□□□ -2.33
CD28P10747 RNU6-99P-201ENST00000364721 107 ntBASIC0.5□□□□□ -2.33
CD28P10747 MIR936-201ENST00000401264 98 ntBASIC0.5□□□□□ -2.33
CD28P10747 MRPS18CP6-201ENST00000423587 223 ntBASIC0.5□□□□□ -2.33
CD28P10747 FCF1P4-201ENST00000448326 183 ntBASIC0.5□□□□□ -2.33
CD28P10747 U8.19-201ENST00000459095 133 ntBASIC0.5□□□□□ -2.33
CD28P10747 MIR2053-201ENST00000459295 91 ntBASIC0.5□□□□□ -2.33
CD28P10747 AC113410.1-201ENST00000505029 247 ntBASIC0.5□□□□□ -2.33
CD28P10747 RNU7-43P-201ENST00000516554 64 ntBASIC0.5□□□□□ -2.33
CD28P10747 RNA5SP325-201ENST00000363756 130 ntBASIC0.49□□□□□ -2.33
CD28P10747 RNA5SP48-201ENST00000363969 126 ntBASIC0.49□□□□□ -2.33
CD28P10747 Y_RNA.279-201ENST00000364763 95 ntBASIC0.49□□□□□ -2.33
CD28P10747 RNU6-110P-201ENST00000384508 104 ntBASIC0.49□□□□□ -2.33
CD28P10747 MIR625-201ENST00000385047 85 ntBASIC0.49□□□□□ -2.33
CD28P10747 MIR136-201ENST00000385207 82 ntBASIC0.49□□□□□ -2.33
CD28P10747 SNORA69.1-201ENST00000390904 137 ntBASIC0.49□□□□□ -2.33
CD28P10747 SNORA75.6-201ENST00000391318 127 ntBASIC0.49□□□□□ -2.33
CD28P10747 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.49□□□□□ -2.33
CD28P10747 U7.7-201ENST00000459276 60 ntBASIC0.49□□□□□ -2.33
CD28P10747 COX6CP6-201ENST00000490840 228 ntBASIC0.49□□□□□ -2.33
CD28P10747 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.49□□□□□ -2.33
CD28P10747 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.49□□□□□ -2.33
CD28P10747 RNU7-41P-201ENST00000515917 61 ntBASIC0.49□□□□□ -2.33
CD28P10747 Y_RNA.655-201ENST00000515919 96 ntBASIC0.49□□□□□ -2.33
CD28P10747 RNU6-1012P-201ENST00000516606 109 ntBASIC0.49□□□□□ -2.33
CD28P10747 RNU11-2P-201ENST00000516898 142 ntBASIC0.49□□□□□ -2.33
CD28P10747 AC131055.1-201ENST00000584626 316 ntBASIC0.49□□□□□ -2.33
CD28P10747 MIR103A2-201ENST00000362154 78 ntBASIC0.48□□□□□ -2.33
CD28P10747 RNA5SP347-201ENST00000362445 119 ntBASIC0.48□□□□□ -2.33
CD28P10747 Y_RNA.172-201ENST00000363765 102 ntBASIC0.48□□□□□ -2.33
CD28P10747 RNU6-767P-201ENST00000384132 107 ntBASIC0.48□□□□□ -2.33
CD28P10747 SNORA72-201ENST00000384339 132 ntBASIC0.48□□□□□ -2.33
CD28P10747 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CD28P10747 RNU4-14P-201ENST00000410858 122 ntBASIC0.48□□□□□ -2.33
CD28P10747 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.48□□□□□ -2.33
CD28P10747 HMGN2P32-201ENST00000444648 269 ntBASIC0.48□□□□□ -2.33
CD28P10747 AL392103.1-201ENST00000447000 198 ntBASIC0.48□□□□□ -2.33
CD28P10747 CHEK2P4-201ENST00000450340 246 ntBASIC0.48□□□□□ -2.33
CD28P10747 RNU6-436P-201ENST00000516171 114 ntBASIC0.48□□□□□ -2.33
CD28P10747 RNU7-30P-201ENST00000516835 62 ntBASIC0.48□□□□□ -2.33
CD28P10747 AC109810.1-201ENST00000534066 224 ntBASIC0.48□□□□□ -2.33
CD28P10747 AC004817.2-201ENST00000561794 651 ntBASIC0.48□□□□□ -2.33
CD28P10747 MIR4764-201ENST00000580680 88 ntBASIC0.48□□□□□ -2.33
CD28P10747 AC005730.3-201ENST00000583067 366 ntBASIC0.48□□□□□ -2.33
CD28P10747 AC006380.1-201ENST00000603598 186 ntBASIC0.48□□□□□ -2.33
CD28P10747 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
CD28P10747 MIR520C-201ENST00000385005 87 ntBASIC0.47□□□□□ -2.33
CD28P10747 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.47□□□□□ -2.33
CD28P10747 RNU6-1156P-201ENST00000410365 100 ntBASIC0.47□□□□□ -2.33
CD28P10747 RPS26P5-201ENST00000418544 335 ntBASIC0.47□□□□□ -2.33
CD28P10747 AC098934.3-201ENST00000430450 190 ntBASIC0.47□□□□□ -2.33
CD28P10747 RPL23AP50-201ENST00000434149 455 ntBASIC0.47□□□□□ -2.33
CD28P10747 RPS20P10-201ENST00000451209 253 ntBASIC0.47□□□□□ -2.33
CD28P10747 RNU6-911P-201ENST00000516523 104 ntBASIC0.47□□□□□ -2.33
CD28P10747 SNORD45.4-201ENST00000516629 73 ntBASIC0.47□□□□□ -2.33
CD28P10747 AC104465.1-201ENST00000611365 139 ntBASIC0.47□□□□□ -2.33
CD28P10747 AC098679.4-201ENST00000624241 654 ntBASIC0.47□□□□□ -2.33
CD28P10747 AC023934.1-201ENST00000574529 2389 ntBASIC0.46□□□□□ -2.34
CD28P10747 RNU6-845P-201ENST00000362578 103 ntBASIC0.46□□□□□ -2.34
CD28P10747 Y_RNA.146-201ENST00000363549 102 ntBASIC0.46□□□□□ -2.34
CD28P10747 RNU6-1188P-201ENST00000363795 107 ntBASIC0.46□□□□□ -2.34
CD28P10747 Y_RNA.230-201ENST00000364348 109 ntBASIC0.46□□□□□ -2.34
CD28P10747 RNU6-1335P-201ENST00000365426 107 ntBASIC0.46□□□□□ -2.34
CD28P10747 SNORD14.1-201ENST00000365609 90 ntBASIC0.46□□□□□ -2.34
CD28P10747 Y_RNA.446-201ENST00000384178 104 ntBASIC0.46□□□□□ -2.34
CD28P10747 MIR516B2-201ENST00000385190 85 ntBASIC0.46□□□□□ -2.34
CD28P10747 SNORD78.2-201ENST00000391076 69 ntBASIC0.46□□□□□ -2.34
CD28P10747 MIR1302-7-201ENST00000408841 72 ntBASIC0.46□□□□□ -2.34
CD28P10747 Y_RNA.599-201ENST00000410489 109 ntBASIC0.46□□□□□ -2.34
CD28P10747 PDCL2P1-201ENST00000419302 352 ntBASIC0.46□□□□□ -2.34
CD28P10747 Y_RNA.635-201ENST00000459041 101 ntBASIC0.46□□□□□ -2.34
CD28P10747 RNU6-1110P-201ENST00000516462 101 ntBASIC0.46□□□□□ -2.34
CD28P10747 RNU6-966P-201ENST00000516479 104 ntBASIC0.46□□□□□ -2.34
CD28P10747 RNU6-229P-201ENST00000516614 102 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms