Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 RNU6-1156P-201ENST00000410365 100 ntBASIC0.44□□□□□ -2.34
MT-ND4P03905 RNU6-436P-201ENST00000516171 114 ntBASIC0.44□□□□□ -2.34
MT-ND4P03905 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.44□□□□□ -2.34
MT-ND4P03905 RNU6-1110P-201ENST00000516462 101 ntBASIC0.44□□□□□ -2.34
MT-ND4P03905 RNU7-30P-201ENST00000516835 62 ntBASIC0.44□□□□□ -2.34
MT-ND4P03905 AC011712.1-201ENST00000588959 234 ntBASIC0.44□□□□□ -2.34
MT-ND4P03905 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
MT-ND4P03905 AC005176.2-201ENST00000596933 147 ntBASIC0.44□□□□□ -2.34
MT-ND4P03905 AC005972.2-201ENST00000604690 348 ntBASIC0.44□□□□□ -2.34
MT-ND4P03905 MIR6504-201ENST00000613520 61 ntBASIC0.44□□□□□ -2.34
MT-ND4P03905 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.44□□□□□ -2.34
MT-ND4P03905 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
MT-ND4P03905 RNU6-654P-201ENST00000364373 107 ntBASIC0.43□□□□□ -2.34
MT-ND4P03905 RNU6-20P-201ENST00000384106 107 ntBASIC0.43□□□□□ -2.34
MT-ND4P03905 Y_RNA.577-201ENST00000384794 101 ntBASIC0.43□□□□□ -2.34
MT-ND4P03905 MIR625-201ENST00000385047 85 ntBASIC0.43□□□□□ -2.34
MT-ND4P03905 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.43□□□□□ -2.34
MT-ND4P03905 RNU6-131P-201ENST00000391144 107 ntBASIC0.43□□□□□ -2.34
MT-ND4P03905 RNU6-1304P-201ENST00000411374 106 ntBASIC0.43□□□□□ -2.34
MT-ND4P03905 SNRPGP10-201ENST00000432323 225 ntBASIC0.43□□□□□ -2.34
MT-ND4P03905 AL392103.1-201ENST00000447000 198 ntBASIC0.43□□□□□ -2.34
MT-ND4P03905 FCF1P4-201ENST00000448326 183 ntBASIC0.43□□□□□ -2.34
MT-ND4P03905 CHEK2P4-201ENST00000450340 246 ntBASIC0.43□□□□□ -2.34
MT-ND4P03905 MTND4P17-201ENST00000470444 350 ntBASIC0.43□□□□□ -2.34
MT-ND4P03905 RNU6-155P-201ENST00000516347 100 ntBASIC0.43□□□□□ -2.34
MT-ND4P03905 AC084782.3-201ENST00000612282 578 ntBASIC0.43□□□□□ -2.34
MT-ND4P03905 AC093783.1-201ENST00000612976 329 ntBASIC0.43□□□□□ -2.34
MT-ND4P03905 AC134026.1-201ENST00000623249 2239 ntBASIC0.43□□□□□ -2.34
MT-ND4P03905 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
MT-ND4P03905 Y_RNA.72-201ENST00000362894 103 ntBASIC0.42□□□□□ -2.34
MT-ND4P03905 RNU6-626P-201ENST00000363354 107 ntBASIC0.42□□□□□ -2.34
MT-ND4P03905 Y_RNA.446-201ENST00000384178 104 ntBASIC0.42□□□□□ -2.34
MT-ND4P03905 SNORA72-201ENST00000384339 132 ntBASIC0.42□□□□□ -2.34
MT-ND4P03905 SNORD111-201ENST00000408139 94 ntBASIC0.42□□□□□ -2.34
MT-ND4P03905 AC244098.3-201ENST00000424803 96 ntBASIC0.42□□□□□ -2.34
MT-ND4P03905 RPS29P1-201ENST00000465274 159 ntBASIC0.42□□□□□ -2.34
MT-ND4P03905 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.42□□□□□ -2.34
MT-ND4P03905 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.42□□□□□ -2.34
MT-ND4P03905 RNU6-358P-201ENST00000516564 75 ntBASIC0.42□□□□□ -2.34
MT-ND4P03905 AC011476.5-201ENST00000615594 130 ntBASIC0.42□□□□□ -2.34
MT-ND4P03905 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.42□□□□□ -2.34
MT-ND4P03905 MIR6516-201ENST00000630554 81 ntBASIC0.42□□□□□ -2.34
MT-ND4P03905 Y_RNA.6-201ENST00000362350 114 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 Y_RNA.148-201ENST00000363557 117 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 RNY3P11-201ENST00000364153 102 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 Y_RNA.368-201ENST00000365547 113 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 RNY3P4-201ENST00000384428 101 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 SNORD28B-201ENST00000390993 75 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 RNU1-119P-201ENST00000391122 165 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 RNA5SP95-201ENST00000410319 137 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 RNU6-994P-201ENST00000410507 111 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 Y_RNA.646-201ENST00000410980 101 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.41□□□□□ -2.34
MT-ND4P03905 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.41□□□□□ -2.34
MT-ND4P03905 HMGN2P32-201ENST00000444648 269 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.41□□□□□ -2.34
MT-ND4P03905 Y_RNA.638-201ENST00000459374 113 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 RNU7-169P-201ENST00000459456 61 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 RNU11-2P-201ENST00000516898 142 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.41□□□□□ -2.34
MT-ND4P03905 MIR4714-201ENST00000580728 77 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 AC008133.2-201ENST00000624540 351 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.41□□□□□ -2.34
MT-ND4P03905 MIR4251-201ENST00000635819 61 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 AC073869.6-201ENST00000640656 341 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 AL442644.1-201ENST00000454390 3105 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 AC027514.1-201ENST00000588561 1603 ntBASIC0.41□□□□□ -2.34
MT-ND4P03905 Y_RNA.146-201ENST00000363549 102 ntBASIC0.4□□□□□ -2.35
MT-ND4P03905 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
MT-ND4P03905 RNA5SP499-201ENST00000363982 119 ntBASIC0.4□□□□□ -2.35
MT-ND4P03905 SNORD113.3-201ENST00000364630 78 ntBASIC0.4□□□□□ -2.35
MT-ND4P03905 RNU6-945P-201ENST00000383947 107 ntBASIC0.4□□□□□ -2.35
MT-ND4P03905 RNU6-310P-201ENST00000384655 107 ntBASIC0.4□□□□□ -2.35
MT-ND4P03905 SNORA75.6-201ENST00000391318 127 ntBASIC0.4□□□□□ -2.35
MT-ND4P03905 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
MT-ND4P03905 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.4□□□□□ -2.35
MT-ND4P03905 MTCO2P27-201ENST00000420740 428 ntBASIC0.4□□□□□ -2.35
MT-ND4P03905 MTND1P4-201ENST00000435196 415 ntBASIC0.4□□□□□ -2.35
MT-ND4P03905 AC067940.1-201ENST00000458411 300 ntBASIC0.4□□□□□ -2.35
MT-ND4P03905 RNU6-264P-201ENST00000517134 104 ntBASIC0.4□□□□□ -2.35
MT-ND4P03905 AC093027.1-201ENST00000546698 429 ntBASIC0.4□□□□□ -2.35
MT-ND4P03905 AC011195.1-201ENST00000578177 177 ntBASIC0.4□□□□□ -2.35
MT-ND4P03905 MIR548AR-201ENST00000582191 57 ntBASIC0.4□□□□□ -2.35
MT-ND4P03905 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
MT-ND4P03905 RNU6-767P-201ENST00000384132 107 ntBASIC0.39□□□□□ -2.35
MT-ND4P03905 RNU6-1067P-201ENST00000384752 107 ntBASIC0.39□□□□□ -2.35
MT-ND4P03905 SNORD78.2-201ENST00000391076 69 ntBASIC0.39□□□□□ -2.35
MT-ND4P03905 MIR1827-201ENST00000408549 66 ntBASIC0.39□□□□□ -2.35
MT-ND4P03905 RNU6-370P-201ENST00000411008 104 ntBASIC0.39□□□□□ -2.35
MT-ND4P03905 AC092628.1-201ENST00000436250 252 ntBASIC0.39□□□□□ -2.35
MT-ND4P03905 MIR4659A-201ENST00000580269 81 ntBASIC0.39□□□□□ -2.35
MT-ND4P03905 AL136317.1-201ENST00000612653 226 ntBASIC0.39□□□□□ -2.35
MT-ND4P03905 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.39□□□□□ -2.35
MT-ND4P03905 MIR8070-201ENST00000616510 88 ntBASIC0.39□□□□□ -2.35
MT-ND4P03905 AC098679.4-201ENST00000624241 654 ntBASIC0.39□□□□□ -2.35
MT-ND4P03905 RNU6-1188P-201ENST00000363795 107 ntBASIC0.38□□□□□ -2.35
MT-ND4P03905 Y_RNA.191-201ENST00000363972 113 ntBASIC0.38□□□□□ -2.35
MT-ND4P03905 Y_RNA.329-201ENST00000365209 107 ntBASIC0.38□□□□□ -2.35
MT-ND4P03905 SNORA2B-201ENST00000384583 137 ntBASIC0.38□□□□□ -2.35
MT-ND4P03905 RNU6-192P-201ENST00000391253 100 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms