Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CLPTM1O96005 RNU6-112P-201ENST00000363599 104 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 Y_RNA.188-201ENST00000363952 111 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 Y_RNA.267-201ENST00000364679 109 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 Y_RNA.539-201ENST00000384635 107 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 RNA5SP100-201ENST00000410903 110 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 RNA5SP59-201ENST00000410922 110 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 AC010154.1-201ENST00000425857 269 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.58□□□□□ -2.16
CLPTM1O96005 RPS27P1-201ENST00000450552 247 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 U8.19-201ENST00000459095 133 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 Y_RNA.637-201ENST00000459424 114 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 RPS29P11-201ENST00000496507 171 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.58□□□□□ -2.16
CLPTM1O96005 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 AC005972.2-201ENST00000604690 348 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 U1.36-201ENST00000620684 176 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 snoU18.1-201ENST00000629629 71 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 MIR6079-201ENST00000635807 62 ntBASIC1.58□□□□□ -2.16
CLPTM1O96005 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
CLPTM1O96005 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CLPTM1O96005 U8.7-201ENST00000364940 136 ntBASIC1.57□□□□□ -2.16
CLPTM1O96005 SNORA4.2-201ENST00000365313 147 ntBASIC1.57□□□□□ -2.16
CLPTM1O96005 RNU6-296P-201ENST00000384608 107 ntBASIC1.57□□□□□ -2.16
CLPTM1O96005 MIR9-3-201ENST00000385084 90 ntBASIC1.57□□□□□ -2.16
CLPTM1O96005 Y_RNA.618-201ENST00000410949 107 ntBASIC1.57□□□□□ -2.16
CLPTM1O96005 AC245047.3-201ENST00000429428 127 ntBASIC1.57□□□□□ -2.16
CLPTM1O96005 AC233266.1-201ENST00000454518 96 ntBASIC1.57□□□□□ -2.16
CLPTM1O96005 RNU1-98P-201ENST00000458992 160 ntBASIC1.57□□□□□ -2.16
CLPTM1O96005 SNORA31.17-201ENST00000516953 127 ntBASIC1.57□□□□□ -2.16
CLPTM1O96005 AC024405.2-202ENST00000532731 184 ntBASIC1.57□□□□□ -2.16
CLPTM1O96005 AC091178.2-201ENST00000584401 117 ntBASIC1.57□□□□□ -2.16
CLPTM1O96005 AL162424.1-201ENST00000602325 221 ntBASIC1.57□□□□□ -2.16
CLPTM1O96005 AC006006.1-201ENST00000603082 144 ntBASIC1.57□□□□□ -2.16
CLPTM1O96005 AC242852.1-201ENST00000612151 96 ntBASIC1.57□□□□□ -2.16
CLPTM1O96005 MIR548AY-201ENST00000617669 107 ntBASIC1.57□□□□□ -2.16
CLPTM1O96005 AC244015.1-201ENST00000622301 99 ntBASIC1.57□□□□□ -2.16
CLPTM1O96005 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.57□□□□□ -2.16
CLPTM1O96005 AC068700.1-201ENST00000565862 3754 ntBASIC1.57□□□□□ -2.16
CLPTM1O96005 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
CLPTM1O96005 Y_RNA.65-201ENST00000362846 100 ntBASIC1.56□□□□□ -2.16
CLPTM1O96005 Y_RNA.76-201ENST00000362931 109 ntBASIC1.56□□□□□ -2.16
CLPTM1O96005 SNORA63D-201ENST00000364359 132 ntBASIC1.56□□□□□ -2.16
CLPTM1O96005 MIR520A-201ENST00000384862 85 ntBASIC1.56□□□□□ -2.16
CLPTM1O96005 MIR764-201ENST00000390811 85 ntBASIC1.56□□□□□ -2.16
CLPTM1O96005 Y_RNA.590-201ENST00000410140 107 ntBASIC1.56□□□□□ -2.16
CLPTM1O96005 RNU2-7P-201ENST00000410794 178 ntBASIC1.56□□□□□ -2.16
CLPTM1O96005 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.56□□□□□ -2.16
CLPTM1O96005 CYCSP49-201ENST00000420810 319 ntBASIC1.56□□□□□ -2.16
CLPTM1O96005 AL591806.2-201ENST00000433122 173 ntBASIC1.56□□□□□ -2.16
CLPTM1O96005 HSPE1P9-201ENST00000440046 311 ntBASIC1.56□□□□□ -2.16
CLPTM1O96005 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.56□□□□□ -2.16
CLPTM1O96005 AP003357.1-201ENST00000604497 148 ntBASIC1.56□□□□□ -2.16
CLPTM1O96005 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.56□□□□□ -2.16
CLPTM1O96005 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CLPTM1O96005 Y_RNA.269-201ENST00000364685 89 ntBASIC1.55□□□□□ -2.16
CLPTM1O96005 RNU6-1080P-201ENST00000383982 107 ntBASIC1.55□□□□□ -2.16
CLPTM1O96005 RNU6-211P-201ENST00000384047 107 ntBASIC1.55□□□□□ -2.16
CLPTM1O96005 MIR520G-201ENST00000385064 90 ntBASIC1.55□□□□□ -2.16
CLPTM1O96005 Y_RNA.621-201ENST00000411065 96 ntBASIC1.55□□□□□ -2.16
CLPTM1O96005 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.55□□□□□ -2.16
CLPTM1O96005 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.55□□□□□ -2.16
CLPTM1O96005 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.55□□□□□ -2.16
CLPTM1O96005 RPL36AP21-201ENST00000490372 323 ntBASIC1.55□□□□□ -2.16
CLPTM1O96005 RPL23AP54-201ENST00000495129 419 ntBASIC1.55□□□□□ -2.16
CLPTM1O96005 RNU6-237P-201ENST00000515985 71 ntBASIC1.55□□□□□ -2.16
CLPTM1O96005 SNORD116-28-201ENST00000516123 91 ntBASIC1.55□□□□□ -2.16
CLPTM1O96005 RNU6-1023P-201ENST00000516137 106 ntBASIC1.55□□□□□ -2.16
CLPTM1O96005 Y_RNA.679-201ENST00000516416 91 ntBASIC1.55□□□□□ -2.16
CLPTM1O96005 RNU7-115P-201ENST00000516433 55 ntBASIC1.55□□□□□ -2.16
CLPTM1O96005 RNU6-111P-201ENST00000517179 105 ntBASIC1.55□□□□□ -2.16
CLPTM1O96005 AC127455.1-201ENST00000565496 145 ntBASIC1.55□□□□□ -2.16
CLPTM1O96005 AC005357.1-201ENST00000588399 301 ntBASIC1.55□□□□□ -2.16
CLPTM1O96005 POLR3GP1-201ENST00000594073 261 ntBASIC1.55□□□□□ -2.16
CLPTM1O96005 MIR8081-201ENST00000611533 95 ntBASIC1.55□□□□□ -2.16
CLPTM1O96005 AL078604.3-201ENST00000615580 211 ntBASIC1.55□□□□□ -2.16
CLPTM1O96005 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.55□□□□□ -2.16
CLPTM1O96005 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.55□□□□□ -2.16
CLPTM1O96005 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CLPTM1O96005 AC100821.1-201ENST00000523153 2479 ntBASIC1.54□□□□□ -2.16
CLPTM1O96005 Y_RNA.20-201ENST00000362479 113 ntBASIC1.54□□□□□ -2.16
CLPTM1O96005 SNORA1B-201ENST00000362535 133 ntBASIC1.54□□□□□ -2.16
CLPTM1O96005 RNU6-379P-201ENST00000363813 104 ntBASIC1.54□□□□□ -2.16
CLPTM1O96005 SNORA20.1-201ENST00000364790 130 ntBASIC1.54□□□□□ -2.16
CLPTM1O96005 RNU6-338P-201ENST00000383888 105 ntBASIC1.54□□□□□ -2.16
CLPTM1O96005 RNU6-1323P-201ENST00000384025 107 ntBASIC1.54□□□□□ -2.16
CLPTM1O96005 AC069257.2-201ENST00000441819 155 ntBASIC1.54□□□□□ -2.16
CLPTM1O96005 SNORD2.1-201ENST00000458762 69 ntBASIC1.54□□□□□ -2.16
CLPTM1O96005 SNORA31.10-201ENST00000516482 106 ntBASIC1.54□□□□□ -2.16
CLPTM1O96005 RNU6-341P-201ENST00000516973 96 ntBASIC1.54□□□□□ -2.16
CLPTM1O96005 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.54□□□□□ -2.16
CLPTM1O96005 AC011604.1-201ENST00000545978 196 ntBASIC1.54□□□□□ -2.16
CLPTM1O96005 AL929325.1-201ENST00000603096 117 ntBASIC1.54□□□□□ -2.16
CLPTM1O96005 AC013791.1-201ENST00000616619 62 ntBASIC1.54□□□□□ -2.16
CLPTM1O96005 AC084768.2-201ENST00000622736 221 ntBASIC1.54□□□□□ -2.16
CLPTM1O96005 Y_RNA.82-201ENST00000363000 102 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms