Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.45□□□□□ -2.34
CPSF4O95639 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.45□□□□□ -2.34
CPSF4O95639 FABP5P4-201ENST00000437203 171 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 CHEK2P4-201ENST00000450340 246 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 Y_RNA.635-201ENST00000459041 101 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 RNU7-169P-201ENST00000459456 61 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 RNU6-436P-201ENST00000516171 114 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 RNU6-1012P-201ENST00000516606 109 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 SNORD45.4-201ENST00000516629 73 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 SNORA18.7-201ENST00000516910 131 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 RNU6-264P-201ENST00000517134 104 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 AC131055.1-201ENST00000584626 316 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 AC005176.2-201ENST00000596933 147 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 AL353765.1-201ENST00000605514 183 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 AC011476.5-201ENST00000615594 130 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 SEPT14P17-201ENST00000617978 177 ntBASIC0.45□□□□□ -2.34
CPSF4O95639 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CPSF4O95639 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
CPSF4O95639 RNU6-1084P-201ENST00000362498 107 ntBASIC0.44□□□□□ -2.34
CPSF4O95639 RNU6-626P-201ENST00000363354 107 ntBASIC0.44□□□□□ -2.34
CPSF4O95639 Y_RNA.160-201ENST00000363677 92 ntBASIC0.44□□□□□ -2.34
CPSF4O95639 RNU6-324P-201ENST00000363957 106 ntBASIC0.44□□□□□ -2.34
CPSF4O95639 Y_RNA.279-201ENST00000364763 95 ntBASIC0.44□□□□□ -2.34
CPSF4O95639 SNORD14.1-201ENST00000365609 90 ntBASIC0.44□□□□□ -2.34
CPSF4O95639 RNU6-890P-201ENST00000384121 107 ntBASIC0.44□□□□□ -2.34
CPSF4O95639 RNY3P4-201ENST00000384428 101 ntBASIC0.44□□□□□ -2.34
CPSF4O95639 MRPS18CP6-201ENST00000423587 223 ntBASIC0.44□□□□□ -2.34
CPSF4O95639 FGF7P6-202ENST00000451282 293 ntBASIC0.44□□□□□ -2.34
CPSF4O95639 RNU6-155P-201ENST00000516347 100 ntBASIC0.44□□□□□ -2.34
CPSF4O95639 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
CPSF4O95639 AC022616.4-201ENST00000522985 181 ntBASIC0.44□□□□□ -2.34
CPSF4O95639 AC109810.1-201ENST00000534066 224 ntBASIC0.44□□□□□ -2.34
CPSF4O95639 MIR4764-201ENST00000580680 88 ntBASIC0.44□□□□□ -2.34
CPSF4O95639 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.44□□□□□ -2.34
CPSF4O95639 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.44□□□□□ -2.34
CPSF4O95639 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.44□□□□□ -2.34
CPSF4O95639 AC068700.1-201ENST00000565862 3754 ntBASIC0.44□□□□□ -2.34
CPSF4O95639 Y_RNA.166-201ENST00000363730 102 ntBASIC0.43□□□□□ -2.34
CPSF4O95639 SNORD50B-201ENST00000364995 70 ntBASIC0.43□□□□□ -2.34
CPSF4O95639 RNU6-110P-201ENST00000384508 104 ntBASIC0.43□□□□□ -2.34
CPSF4O95639 SNORD78.2-201ENST00000391076 69 ntBASIC0.43□□□□□ -2.34
CPSF4O95639 Y_RNA.605-201ENST00000410577 105 ntBASIC0.43□□□□□ -2.34
CPSF4O95639 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.43□□□□□ -2.34
CPSF4O95639 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
CPSF4O95639 RN7SKP164-201ENST00000516138 266 ntBASIC0.43□□□□□ -2.34
CPSF4O95639 RNU7-4P-201ENST00000516961 62 ntBASIC0.43□□□□□ -2.34
CPSF4O95639 AC144568.1-201ENST00000520139 137 ntBASIC0.43□□□□□ -2.34
CPSF4O95639 MIR3124-201ENST00000582636 67 ntBASIC0.43□□□□□ -2.34
CPSF4O95639 MIR5690-201ENST00000583739 73 ntBASIC0.43□□□□□ -2.34
CPSF4O95639 AC005972.2-201ENST00000604690 348 ntBASIC0.43□□□□□ -2.34
CPSF4O95639 AC104465.1-201ENST00000611365 139 ntBASIC0.43□□□□□ -2.34
CPSF4O95639 TPTEP1-208ENST00000636884 213 ntBASIC0.43□□□□□ -2.34
CPSF4O95639 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
CPSF4O95639 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
CPSF4O95639 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CPSF4O95639 RNA5SP432-201ENST00000362480 116 ntBASIC0.42□□□□□ -2.34
CPSF4O95639 Y_RNA.146-201ENST00000363549 102 ntBASIC0.42□□□□□ -2.34
CPSF4O95639 snoU2-30.1-201ENST00000365012 70 ntBASIC0.42□□□□□ -2.34
CPSF4O95639 SNORD81.2-201ENST00000365153 76 ntBASIC0.42□□□□□ -2.34
CPSF4O95639 SNORA72-201ENST00000384339 132 ntBASIC0.42□□□□□ -2.34
CPSF4O95639 SNORD89-201ENST00000390981 114 ntBASIC0.42□□□□□ -2.34
CPSF4O95639 Y_RNA.599-201ENST00000410489 109 ntBASIC0.42□□□□□ -2.34
CPSF4O95639 AC098934.3-201ENST00000430450 190 ntBASIC0.42□□□□□ -2.34
CPSF4O95639 MTCO3P10-201ENST00000455912 772 ntBASIC0.42□□□□□ -2.34
CPSF4O95639 SNORD123-201ENST00000459473 70 ntBASIC0.42□□□□□ -2.34
CPSF4O95639 PRDX4P1-201ENST00000507189 574 ntBASIC0.42□□□□□ -2.34
CPSF4O95639 RNU6-470P-201ENST00000515954 104 ntBASIC0.42□□□□□ -2.34
CPSF4O95639 MIR4659A-201ENST00000580269 81 ntBASIC0.42□□□□□ -2.34
CPSF4O95639 Y_RNA.191-201ENST00000363972 113 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 Y_RNA.329-201ENST00000365209 107 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 RNU6-708P-201ENST00000384217 107 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 MIR15B-201ENST00000385045 98 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 MT-TL1-201ENST00000386347 75 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 RNU6-131P-201ENST00000391144 107 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 SNRPGP10-201ENST00000432323 225 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 U7.7-201ENST00000459276 60 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 Y_RNA.638-201ENST00000459374 113 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 COX6CP6-201ENST00000490840 228 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 AC113410.1-201ENST00000505029 247 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 RNU7-43P-201ENST00000516554 64 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 MTND4LP26-201ENST00000518144 282 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 AC022441.3-201ENST00000605737 136 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 RNU6-94P-201ENST00000607728 107 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 MIR6504-201ENST00000613520 61 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 U2.1-201ENST00000618978 145 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 7SK.10-201ENST00000621414 298 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 AC138305.3-201ENST00000624988 240 ntBASIC0.41□□□□□ -2.34
CPSF4O95639 RNA5SP347-201ENST00000362445 119 ntBASIC0.4□□□□□ -2.35
CPSF4O95639 RNA5SP48-201ENST00000363969 126 ntBASIC0.4□□□□□ -2.35
CPSF4O95639 Y_RNA.314-201ENST00000365114 102 ntBASIC0.4□□□□□ -2.35
CPSF4O95639 Y_RNA.368-201ENST00000365547 113 ntBASIC0.4□□□□□ -2.35
CPSF4O95639 RNU6-192P-201ENST00000391253 100 ntBASIC0.4□□□□□ -2.35
CPSF4O95639 RNU6-876P-201ENST00000391295 104 ntBASIC0.4□□□□□ -2.35
CPSF4O95639 SNORD99-201ENST00000408612 74 ntBASIC0.4□□□□□ -2.35
CPSF4O95639 MIR548J-201ENST00000408833 112 ntBASIC0.4□□□□□ -2.35
CPSF4O95639 AC096644.2-201ENST00000429278 159 ntBASIC0.4□□□□□ -2.35
CPSF4O95639 MTND1P2-201ENST00000430604 821 ntBASIC0.4□□□□□ -2.35
CPSF4O95639 AC092628.1-201ENST00000436250 252 ntBASIC0.4□□□□□ -2.35
CPSF4O95639 HMGN2P32-201ENST00000444648 269 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms