Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 JPX_2.1-201ENST00000614161 69 ntBASIC2.83□□□□□ -1.96
SRGAP3O43295 MIR6129-201ENST00000616087 109 ntBASIC2.83□□□□□ -1.96
SRGAP3O43295 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.83□□□□□ -1.96
SRGAP3O43295 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
SRGAP3O43295 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.82□□□□□ -1.96
SRGAP3O43295 SNORA63.4-201ENST00000362763 126 ntBASIC2.82□□□□□ -1.96
SRGAP3O43295 SNORA3.2-201ENST00000408221 125 ntBASIC2.82□□□□□ -1.96
SRGAP3O43295 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.82□□□□□ -1.96
SRGAP3O43295 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.82□□□□□ -1.96
SRGAP3O43295 AC245102.2-201ENST00000448956 180 ntBASIC2.82□□□□□ -1.96
SRGAP3O43295 RNU5E-3P-201ENST00000515913 68 ntBASIC2.82□□□□□ -1.96
SRGAP3O43295 RNU6-772P-201ENST00000516042 105 ntBASIC2.82□□□□□ -1.96
SRGAP3O43295 Y_RNA.692-201ENST00000516627 105 ntBASIC2.82□□□□□ -1.96
SRGAP3O43295 AL160236.1-201ENST00000556317 195 ntBASIC2.82□□□□□ -1.96
SRGAP3O43295 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.82□□□□□ -1.96
SRGAP3O43295 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.82□□□□□ -1.96
SRGAP3O43295 AC064859.1-201ENST00000624741 174 ntBASIC2.82□□□□□ -1.96
SRGAP3O43295 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SRGAP3O43295 MAPK10-322ENST00000641485 4530 ntBASIC2.82□□□□□ -1.96
SRGAP3O43295 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.81□□□□□ -1.96
SRGAP3O43295 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SRGAP3O43295 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SRGAP3O43295 RNU6-1209P-201ENST00000363655 107 ntBASIC2.81□□□□□ -1.96
SRGAP3O43295 Y_RNA.796-201ENST00000364268 102 ntBASIC2.81□□□□□ -1.96
SRGAP3O43295 Y_RNA.634-201ENST00000364811 113 ntBASIC2.81□□□□□ -1.96
SRGAP3O43295 Y_RNA.799-201ENST00000364992 102 ntBASIC2.81□□□□□ -1.96
SRGAP3O43295 Y_RNA.563-201ENST00000384707 108 ntBASIC2.81□□□□□ -1.96
SRGAP3O43295 RNU6-476P-201ENST00000384726 107 ntBASIC2.81□□□□□ -1.96
SRGAP3O43295 MLLT10P1-201ENST00000418346 262 ntBASIC2.81□□□□□ -1.96
SRGAP3O43295 AL158823.1-201ENST00000418441 478 ntBASIC2.81□□□□□ -1.96
SRGAP3O43295 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.81□□□□□ -1.96
SRGAP3O43295 MTCO1P44-201ENST00000441935 243 ntBASIC2.81□□□□□ -1.96
SRGAP3O43295 CYP2C59P-201ENST00000457790 269 ntBASIC2.81□□□□□ -1.96
SRGAP3O43295 SNORD11-201ENST00000459124 84 ntBASIC2.81□□□□□ -1.96
SRGAP3O43295 AC023141.11-201ENST00000508864 202 ntBASIC2.81□□□□□ -1.96
SRGAP3O43295 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.81□□□□□ -1.96
SRGAP3O43295 RNU6-1096P-201ENST00000517089 102 ntBASIC2.81□□□□□ -1.96
SRGAP3O43295 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SRGAP3O43295 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SRGAP3O43295 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SRGAP3O43295 RNU1-109P-201ENST00000383960 147 ntBASIC2.8□□□□□ -1.96
SRGAP3O43295 RNU6-429P-201ENST00000384582 108 ntBASIC2.8□□□□□ -1.96
SRGAP3O43295 MIR221-201ENST00000385135 110 ntBASIC2.8□□□□□ -1.96
SRGAP3O43295 RNU6-1186P-201ENST00000410429 97 ntBASIC2.8□□□□□ -1.96
SRGAP3O43295 RNA5SP492-201ENST00000411330 114 ntBASIC2.8□□□□□ -1.96
SRGAP3O43295 AC007064.1-201ENST00000412238 351 ntBASIC2.8□□□□□ -1.96
SRGAP3O43295 Z98742.3-201ENST00000418637 326 ntBASIC2.8□□□□□ -1.96
SRGAP3O43295 AC123900.1-201ENST00000420390 96 ntBASIC2.8□□□□□ -1.96
SRGAP3O43295 RPS29P12-201ENST00000460178 152 ntBASIC2.8□□□□□ -1.96
SRGAP3O43295 RNA5SP153-201ENST00000516498 76 ntBASIC2.8□□□□□ -1.96
SRGAP3O43295 SNORA31.11-201ENST00000516528 139 ntBASIC2.8□□□□□ -1.96
SRGAP3O43295 Y_RNA.712-201ENST00000517011 92 ntBASIC2.8□□□□□ -1.96
SRGAP3O43295 AC073413.2-201ENST00000604332 360 ntBASIC2.8□□□□□ -1.96
SRGAP3O43295 AL049779.4-201ENST00000604500 156 ntBASIC2.8□□□□□ -1.96
SRGAP3O43295 Pinc.1-201ENST00000616452 154 ntBASIC2.8□□□□□ -1.96
SRGAP3O43295 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.8□□□□□ -1.96
SRGAP3O43295 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
SRGAP3O43295 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
SRGAP3O43295 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SRGAP3O43295 SNORD18B-201ENST00000365659 72 ntBASIC2.79□□□□□ -1.96
SRGAP3O43295 AC093259.1-201ENST00000509755 300 ntBASIC2.79□□□□□ -1.96
SRGAP3O43295 RNU6-1061P-201ENST00000516530 99 ntBASIC2.79□□□□□ -1.96
SRGAP3O43295 RNU7-149P-201ENST00000516739 59 ntBASIC2.79□□□□□ -1.96
SRGAP3O43295 RNU6-856P-201ENST00000516959 98 ntBASIC2.79□□□□□ -1.96
SRGAP3O43295 AC133485.4-201ENST00000561835 220 ntBASIC2.79□□□□□ -1.96
SRGAP3O43295 AC138907.4-201ENST00000570107 226 ntBASIC2.79□□□□□ -1.96
SRGAP3O43295 AC131055.1-201ENST00000584626 316 ntBASIC2.79□□□□□ -1.96
SRGAP3O43295 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SRGAP3O43295 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SRGAP3O43295 Y_RNA.120-201ENST00000363304 110 ntBASIC2.78□□□□□ -1.96
SRGAP3O43295 RNU1-91P-201ENST00000364746 163 ntBASIC2.78□□□□□ -1.96
SRGAP3O43295 RNU6-1144P-201ENST00000384247 104 ntBASIC2.78□□□□□ -1.96
SRGAP3O43295 SNORA26-201ENST00000391286 122 ntBASIC2.78□□□□□ -1.96
SRGAP3O43295 U6.73-201ENST00000619194 103 ntBASIC2.78□□□□□ -1.96
SRGAP3O43295 FO624990.1-201ENST00000636373 85 ntBASIC2.78□□□□□ -1.96
SRGAP3O43295 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
SRGAP3O43295 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.78□□□□□ -1.96
SRGAP3O43295 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.78□□□□□ -1.97
SRGAP3O43295 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SRGAP3O43295 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.77□□□□□ -1.97
SRGAP3O43295 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SRGAP3O43295 SNORA68.1-201ENST00000364537 132 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 Y_RNA.332-201ENST00000365271 113 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 RNU6-301P-201ENST00000384277 107 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 MIR562-201ENST00000384894 95 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SRGAP3O43295 RNU2-63P-201ENST00000410792 194 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 AL513477.1-202ENST00000417061 214 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 AC060773.1-201ENST00000421698 310 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.77□□□□□ -1.97
SRGAP3O43295 AC233266.1-201ENST00000454518 96 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 RN7SL429P-201ENST00000479090 223 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 RN7SL489P-201ENST00000486185 223 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 RN7SL327P-201ENST00000488659 223 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 OR9P1P-201ENST00000496431 281 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 SNORA18.4-201ENST00000516440 124 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 Y_RNA.690-201ENST00000516603 95 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 SNORA48.11-201ENST00000517015 89 ntBASIC2.77□□□□□ -1.97
SRGAP3O43295 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.77□□□□□ -1.97
SRGAP3O43295 AC097639.2-201ENST00000603159 172 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms